PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513301.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family NAC
Protein Properties Length: 296aa    MW: 33953.6 Da    PI: 8.0634
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513301.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM162.51.6e-50241482128
             NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                      pGfrFhPtdeelv++yL++kv++++l+l e ik++diyk+ PwdLp++ + +ekewyfF+kr +ky+++ r+nr+t sg+Wkatg dk++++ +
  XP_023513301.1  24 LPGFRFHPTDEELVSFYLRRKVHNNPLPL-ELIKQIDIYKHSPWDLPRN-ALGEKEWYFFCKRGRKYKNSARPNRVTGSGFWKATGIDKPIYHDR 116
                     59***************************.89***************43.45899**************************************** PP

             NAM  97 gelvglkktLvfykgrapkgektdWvmheyrl 128
                     + lvglkktLv+y+g+a k++kt+W+m+e+rl
  XP_023513301.1 117 SVLVGLKKTLVYYRGSAGKATKTQWMMNEFRL 148
                     ******************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MAGSPSQFSD IAMNDDDDDS QSHLPGFRFH PTDEELVSFY LRRKVHNNPL PLELIKQIDI  60
YKHSPWDLPR NALGEKEWYF FCKRGRKYKN SARPNRVTGS GFWKATGIDK PIYHDRSVLV  120
GLKKTLVYYR GSAGKATKTQ WMMNEFRLPS SSSSSSASLD EAEIWTLCRI FKRNISTRKP  180
NAPNWREVPA AKNRALENMN FRATSNRYSD EQSSYISFSS DYSFISFSDQ SQMTHGGQSM  240
RNFCSRSEQQ PSGNRNSLAN VSPSSSFSDF DEDATDLFGY EKWEELKSIL ESDLDS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G43000.12e-77NAC family protein