PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_023513295.1
Organism
Cucurbita pepo subsp. pepo
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
Family GATA
Protein Properties Length: 265aa    MW: 29439.7 Da    PI: 8.8551
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_023513295.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA56.15.2e-18217251133
            GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkk 33 
                     C+  nC+t  Tp+WR+gp g+k+LCnaCG++yrk+
  XP_023513295.1 217 CTnyNCNTNFTPMWRKGPLGPKSLCNACGIRYRKE 251
                     55559****************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MEPHIWRPMS QMKTQEHDLP RFHSESQVDL TLRLGFPNGN DSGNANASAN ANANANANAN  60
ANAGERPDID HSKPFFSAPI HSINHHALQP HQVMVNNNHG LASSGGRSGE MMSEANYNPH  120
QIVWSKELKT YVLKSNNFGQ LHPSLYCNTY PAKTIGSTAN SMANLPLQNY NNDQYTLLNP  180
ACRKTDDHEA EASSGGGRRR GLQRRRVSAC NEVERRCTNY NCNTNFTPMW RKGPLGPKSL  240
CNACGIRYRK EIMNKEAVAA ENNHG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.17e-16GATA family protein