PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_023512517.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 251aa MW: 28198.6 Da PI: 8.8667 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 101.7 | 4.8e-32 | 16 | 69 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv a++ LGG++kAtPk +l+lm+vkgLt++hvkSHLQ+YR+ XP_023512517.1 16 PRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRS 69 8****************************************************7 PP | |||||||
2 | Myb_DNA-binding | 48.2 | 2.5e-15 | 17 | 68 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++ +v a++ lGg+ t+k++ + m kg+t ++ks++q+y+ XP_023512517.1 17 RLRWTPELHHCFVLAIQTLGGHhkaTPKLVLQLMDvKGLTISHVKSHLQMYR 68 89************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 251 aa Download sequence |
MSRNGSVRQY IRSKVPRLRW TPELHHCFVL AIQTLGGHHK ATPKLVLQLM DVKGLTISHV 60 KSHLQMYRST RADMGRQDHK CSSVGRKVSN LEEEDEDGCV EEENVKGGGV IYRSTTTTTT 120 RTSASKRGNR SSRNDGFYGH KEIKMMMIMG DSESHGVALN QSAANHAFFK MMKKEDEEKE 180 LSLCLSLQHH CHGSSSEISE AISSSSSKLD NNHNNNHNNS YRDCSSWSYG RQQQQQIGVN 240 LELSMALCGS R |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G02060.1 | 2e-31 | G2-like family protein |