PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512275.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

NAC

Protein Properties

Length: 301aa MW: 34745.9 Da PI: 8.1996

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512275.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	158	3.8e-49	15	143	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk. 95 pGfrFhPtdeelv +yL++kv++k + + e ik++diyk+ PwdLp + + ++kewyfF+kr++ky+++ r+nr+t sg+Wkatg dk ++s+ XP_023512275.1 15 PGFRFHPTDEELVGFYLRRKVDKKAIGT-ELIKSTDIYKHSPWDLPnSGNNLGDKEWYFFCKRARKYKNSIRPNRVTGSGFWKATGIDKVICSHg 108 9**********************999.89***********445556999**********************************86 PP NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128 +++ +glkktLv+ykg+a +g+kt+W+mhe+rl XP_023512275.1 109 gqGNRCIGLKKTLVYYKGNAGRGTKTEWMMHEFRL 143 655556*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 301 aa Download sequence
MFTEGEIDDC QFPLPGFRFH PTDEELVGFY LRRKVDKKAI GTELIKSTDI YKHSPWDLPN 60 SGNNLGDKEW YFFCKRARKY KNSIRPNRVT GSGFWKATGI DKVICSHGGQ GNRCIGLKKT 120 LVYYKGNAGR GTKTEWMMHE FRLPSHTLNT PPSIFARIRN NLQEAEIWTL CRIFQRSVSS 180 TKYAPNCRKI AAGNDGSINM NSNDNSFYSQ DQCYDGDSNY ISFGSSFINF EEKKPLITDH 240 PLMMNFSSIS EERERERERE RERERERDPC SSIIQSPPSS FSNFDGDATD HLFGYNQLLN 300 Q

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	253	263	RERERERERER
2	255	265	RERERERERER
3	257	267	RERERERERER

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43000.1	6e-76	NAC family protein