PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023512204.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | YABBY | ||||||||
Protein Properties | Length: 176aa MW: 19487.1 Da PI: 9.4174 | ||||||||
Description | YABBY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | YABBY | 225.1 | 1.8e-69 | 6 | 166 | 5 | 169 |
YABBY 5 ssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsvsse 99 ++e+vCyv+CnfCntilavsvP + +f++vtvrCGhC++llsvn+ + q+l+ ++ + ++++ + ++++ +s ++++s+ t+++s XP_023512204.1 6 MAAERVCYVHCNFCNTILAVSVPCNNMFTLVTVRCGHCSNLLSVNMGASLQVLPPQDSPPGNKQQQVSGGDWSKDRGSSSSSSSSSSKCTKIAS- 99 5789****************************************************97333333333333333333333333333333333332. PP YABBY 100 klsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfg 169 l ++ +++ r+pp irPPek+qrvPsaynrfikeeiqrika+nPdishreafs+aaknWah+P+i g XP_023512204.1 100 -L-DSAERDQHRIPP-IRPPEKKQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNWAHYPHIRCG 166 .3.344555566667.9*************************************************9876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MSLEMMAAER VCYVHCNFCN TILAVSVPCN NMFTLVTVRC GHCSNLLSVN MGASLQVLPP 60 QDSPPGNKQQ QVSGGDWSKD RGSSSSSSSS SSKCTKIASL DSAERDQHRI PPIRPPEKKQ 120 RVPSAYNRFI KEEIQRIKAN NPDISHREAF STAAKNWAHY PHIRCGQKVD GNKQTK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08465.1 | 4e-66 | YABBY family protein |