PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_023512151.1

Organism

Cucurbita pepo subsp. pepo

Taxonomic ID

3664

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo

Family

Trihelix

Protein Properties

Length: 279aa MW: 33139.4 Da PI: 9.3414

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_023512151.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	59.7	7.2e-19	14	102	1	86
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 +W+++e+++ i++r ++e++l + + +kk+lW+ s++mrergf r++ qCk+kw+nl ryk +++ k+ +cp+f++++ XP_023512151.1 14 QWSEEETREFIRIRADLERDLTAVStgegaavKKKTLWDMASARMRERGFWRTAYQCKCKWKNLLSRYKGKETTHKE----FGWQCPFFEEIR 102 7******************97544557777**********************************9999997....4668**9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 279 aa Download sequence
MTSSAMAATA QQHQWSEEET REFIRIRADL ERDLTAVSTG EGAAVKKKTL WDMASARMRE 60 RGFWRTAYQC KCKWKNLLSR YKGKETTHKE FGWQCPFFEE IRAVFAVREK AMHRLLLEPE 120 AGSSATKKRG RERSLEEYSD LKELDEEESE EEIPTQSNSQ KGKAIGTQYP AKSLRTAGSK 180 RSSSSVSNEI LELLKGFFQW QQRMEMEWRE ILERHYNNRR MLEQEWRDSM EKLERERLMT 240 EKAWREREEQ RKKRQDIRAQ GMDALLTDLL NKLNRENNL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	245	254	REREEQRKKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G01380.1	3e-28	Trihelix family protein