PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023512022.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | WOX | ||||||||
Protein Properties | Length: 151aa MW: 18077.9 Da PI: 10.798 | ||||||||
Description | WOX family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 62.6 | 6e-20 | 10 | 69 | 3 | 57 |
--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS Homeobox 3 kRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 +R+++t+eq+ +Lee +++ ++p+a+++++++++l +++ ++V++WFqN++a++++ XP_023512022.1 10 SRWCPTPEQVMILEEIYRNgLKTPNATQIQHITSHLslygKIEGKNVFYWFQNHKARDRQ 69 7*****************99*************************************996 PP | |||||||
2 | Wus_type_Homeobox | 117.6 | 5.8e-38 | 9 | 70 | 3 | 64 |
Wus_type_Homeobox 3 rtRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64 +RW+PtpeQ++iLee+y++Gl+tPn+ +iq+it++L+ yGkie+kNVfyWFQN+kaR+rqk XP_023512022.1 9 PSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFYWFQNHKARDRQK 70 58***********************************************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 151 aa Download sequence |
MSPAAAATPS RWCPTPEQVM ILEEIYRNGL KTPNATQIQH ITSHLSLYGK IEGKNVFYWF 60 QNHKARDRQK LRRKLYKQLQ QHHFFIKRQR FDDHHLFHCF LHHHHHQQRF LPPLLPLPTH 120 FQVRKFIGIT TFQNGIILSV TNPMWDLGWG I |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G28610.1 | 1e-39 | WOX family protein |