PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_023511443.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita; Cucurbita pepo
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Family | NAC | ||||||||
Protein Properties | Length: 214aa MW: 24393.1 Da PI: 4.9095 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 109.7 | 3.4e-34 | 12 | 137 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 lppGfrFhPtdeelvv++L++k++ +++ +vi+++d++ ++Pw+L+ k+ +e ++wyf+s++ r+t++gyW+ g+d +vls+ XP_023511443.1 12 LPPGFRFHPTDEELVVHFLHRKAALLPCHP-DVIPDLDLFPYDPWELEGKALGEGNRWYFYSRKID--------ARVTDNGYWNPLGRDDPVLST 97 79*************************999.99**************977778899******9866........599****************99 PP NAM 96 .kgelvglkktLvfy......kgrapkgektdWvmheyrl 128 ++++vg+kk + f+ a ++ kt+W+mheyrl XP_023511443.1 98 aTSQVVGMKKYFLFHaaatatASAAADPIKTNWIMHEYRL 137 78889**********77766546777788*********98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 214 aa Download sequence |
MAAADHSHNF NLPPGFRFHP TDEELVVHFL HRKAALLPCH PDVIPDLDLF PYDPWELEGK 60 ALGEGNRWYF YSRKIDARVT DNGYWNPLGR DDPVLSTATS QVVGMKKYFL FHAAATATAS 120 AAADPIKTNW IMHEYRLPDA ASSSSSSSSS STRSSRRRGR PKRDYSKWVL CRVYERDEEK 180 EEEEEEDGAE LSCLDEVFLS LEDLDEISLP TRIQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 157 | 164 | RRGRPKRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G64530.1 | 5e-73 | NAC family protein |