PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964929.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

WRKY

Protein Properties

Length: 559aa MW: 61154.9 Da PI: 8.2079

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964929.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	106.1	1.8e-33	224	281	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_022964929.1 224 DDGYNWRKYGQKQVKGSENPRSYYKCTFPSCPTKKKVERSL-DGQITEIVYKGSHNHPK 281 8**************************************.*************85 PP
2	WRKY	105.7	2.4e-33	398	456	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct +gCpv+k+ver+++d+++v++tYeg+Hnh+ XP_022964929.1 398 LDDGYRWRKYGQKVVKGNPNPRSYYKCTNPGCPVRKHVERASHDQRAVITTYEGKHNHD 456 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MASSSGSLDT SGNSHPSFTF SSHPFMTTSY SDLLASGIDD PPSSATPHGS LRSSTTGVPK 60 FKSLPPPSLP LSPSSFFAIP PGLSPAELLD SPVLLSASHP LPSPTTGSFP SQSLNWKNNY 120 GYNQQSIKEE NKYLSNFSFQ TQSSKPPPSS FQPSSTTAPM SWSFQEQGKK QDGFSSENNM 180 VKQSFSPEYG IVQNQSQING GGQLQSDYGN NYPQQSQTVN RRSDDGYNWR KYGQKQVKGS 240 ENPRSYYKCT FPSCPTKKKV ERSLDGQITE IVYKGSHNHP KPQSTRRSSL SSAGSSLSMV 300 VSNPAANEMA DQSFTTQSSA QFDGVATPEN SSISIGDDDF DRSSQKSKSG GDDYDEVEPE 360 AKRWRREVEN NEGMSAAGSR TVREPRVVVQ TTSDIDILDD GYRWRKYGQK VVKGNPNPRS 420 YYKCTNPGCP VRKHVERASH DQRAVITTYE GKHNHDVPPA RGSGSHSLSR AFPNNDPPAT 480 AIRPSAVAHQ SNNGGHQSLQ TAFAVEMVQN PNGFSFPEFG NSMGMGSGSY MNQTQPNHNF 540 ARAKEEPRDH DMFIQSLLC

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MASSSGSLDT SGNSHPSFTF SSHPFMTTSY SDLLASGIDD PPSSATPHGS LRSSTTGVPK  60
FKSLPPPSLP LSPSSFFAIP PGLSPAELLD SPVLLSASHP LPSPTTGSFP SQSLNWKNNY  120
GYNQQSIKEE NKYLSNFSFQ TQSSKPPPSS FQPSSTTAPM SWSFQEQGKK QDGFSSENNM  180
VKQSFSPEYG IVQNQSQING GGQLQSDYGN NYPQQSQTVN RRSDDGYNWR KYGQKQVKGS  240
ENPRSYYKCT FPSCPTKKKV ERSLDGQITE IVYKGSHNHP KPQSTRRSSL SSAGSSLSMV  300
VSNPAANEMA DQSFTTQSSA QFDGVATPEN SSISIGDDDF DRSSQKSKSG GDDYDEVEPE  360
AKRWRREVEN NEGMSAAGSR TVREPRVVVQ TTSDIDILDD GYRWRKYGQK VVKGNPNPRS  420
YYKCTNPGCP VRKHVERASH DQRAVITTYE GKHNHDVPPA RGSGSHSLSR AFPNNDPPAT  480
AIRPSAVAHQ SNNGGHQSLQ TAFAVEMVQN PNGFSFPEFG NSMGMGSGSY MNQTQPNHNF  540
ARAKEEPRDH DMFIQSLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-109	WRKY family protein