PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964875.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 682aa MW: 75787.2 Da PI: 9.3227

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964875.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	23.3	1.5e-07	574	623	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 r +++ E e lv+av++lG+g+W+ + + k+Rt ++k++w ++ XP_022964875.1 574 RRPFSVAEVEALVQAVEKLGTGRWRDVKLRAFdnaKHRTYVDLKDKWKTL 623 6789999*****************9988889************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 682 aa Download sequence
MVLQKRLDYG FHGYQVPTMP RATRSVRKRS LCRKGTEGSQ MRAFDLLATV ADKLLHGADG 60 PTTTTTDTST EKDRYAVMNK ELDANSLLKV EPSDRGSCDQ GFVSELVLSG HEKKCDLNGC 120 LPQHDEDSPP QLVSVVTNFD KSKEMGNLAS EVHVGSPRSK ESDNFELDGK SKVIVKYELH 180 KTEEVLTGTQ DQYDSCKRED PVIWDQKAHV LGNSNGCGKM TQDKQIIQNS SFATQNNVKL 240 VDRDDDENSS GCTHPVSSIK SFRTVPSSRD RRIKKVSASK SWKVVPRCRD ESLSKTDGIW 300 KSMFRSKSSH DSCRRQKSQM NIPFKKRKFF DCSSSVSNSD CGINSEGLSD STGKVFNSDT 360 SGRSCSASGH GHHKSFPSKD SHVKIRIKSF RVPELFIEIS ETATVGSLKR TVMEAVTAVL 420 GGGIRVGVLL QGKKVRDDNK TLFQTGISHD NQLDSLGFAL EPNPSRTPLA LCQEDSPCIL 480 PCDAPEPLTR YSPDASADHP GSSNVLPEPH GDSLGHFIES DHDSAPSPTN TSNHKSTTDS 540 KALVNVPAMT VEALTIVPMH RKSKRSEVAQ RRIRRPFSVA EVEALVQAVE KLGTGRWRDV 600 KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLSA HAYWSKQQAK 660 YQLKRQPETT TPMNKKTQQS WG

Sequence ? help Back to Top

Protein Sequence Length: 682 aa Download sequence

MVLQKRLDYG FHGYQVPTMP RATRSVRKRS LCRKGTEGSQ MRAFDLLATV ADKLLHGADG  60
PTTTTTDTST EKDRYAVMNK ELDANSLLKV EPSDRGSCDQ GFVSELVLSG HEKKCDLNGC  120
LPQHDEDSPP QLVSVVTNFD KSKEMGNLAS EVHVGSPRSK ESDNFELDGK SKVIVKYELH  180
KTEEVLTGTQ DQYDSCKRED PVIWDQKAHV LGNSNGCGKM TQDKQIIQNS SFATQNNVKL  240
VDRDDDENSS GCTHPVSSIK SFRTVPSSRD RRIKKVSASK SWKVVPRCRD ESLSKTDGIW  300
KSMFRSKSSH DSCRRQKSQM NIPFKKRKFF DCSSSVSNSD CGINSEGLSD STGKVFNSDT  360
SGRSCSASGH GHHKSFPSKD SHVKIRIKSF RVPELFIEIS ETATVGSLKR TVMEAVTAVL  420
GGGIRVGVLL QGKKVRDDNK TLFQTGISHD NQLDSLGFAL EPNPSRTPLA LCQEDSPCIL  480
PCDAPEPLTR YSPDASADHP GSSNVLPEPH GDSLGHFIES DHDSAPSPTN TSNHKSTTDS  540
KALVNVPAMT VEALTIVPMH RKSKRSEVAQ RRIRRPFSVA EVEALVQAVE KLGTGRWRDV  600
KLRAFDNAKH RTYVDLKDKW KTLVHTARIS PQQRRGEPVP QELLDRVLSA HAYWSKQQAK  660
YQLKRQPETT TPMNKKTQQS WG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G07540.1	1e-126	MYB_related family protein