PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964689.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 670aa    MW: 76099.8 Da    PI: 6.4501
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964689.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS384.31.4e-1173006673373
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL++cA+a+s+ d++ a++lL+++++++sp+gd +qRla+yf+++L++rla  ++ ly  ++++ets    +e l+a+++f +++P+ ++s++ 
  XP_022964689.1 300 TLLTQCAQAISNYDQRTANELLNQIRQHSSPSGDGNQRLAHYFANGLETRLAA-GTPLYMPFASNETS---AAEILKAFQMFIKACPFRRMSYFY 390
                     69**************************************************9.99999888888877...9*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN++I++ +e+e+++HiiDf+i +GlQWp+L+q L+ Rp+gpp++RiTg++ p++g   +e++e+tg+rLa+++++++vpfe++v +a+++e+++
  XP_022964689.1 391 ANRTIMKLAEKETTLHIIDFGILYGLQWPCLIQRLSRRPGGPPKVRITGIELPQPGfrPAERVEQTGRRLAHYCKRFNVPFEYKV-LAQKWETVK 484
                     *******************************************************9*****************************.6******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     +e+L+v+++E ++V + ++l++++de+v  +s+rd+vLkl+++++P+++++   + + n++ F +rf eal +ys+lfd++ea++pr+  er+  
  XP_022964689.1 485 YEDLNVNRDELTIVTCLFRLKNVPDETVVANSPRDRVLKLIRKINPDLFIHEVMNGSFNTPFFNTRFKEALFHYSSLFDMYEATMPRDIPERHLC 579
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                     E+e+lgr+ivnv+aceg er+er et+++W+ r ++aGFk+vpl+++  k+++ ++++ + + + ++++  ++++gWk+r ++++S+W
  XP_022964689.1 580 EKEILGRDIVNVIACEGLERVERPETYKQWQVRNTRAGFKQVPLDQDLLKNVEKIVNTEYHQDFVIDQDGSWMLQGWKGRIIYALSCW 667
                     **********************************************************99888************************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    
MDNILDDFPN SFNNFHFNPQ LSNGFLKINR ETVDPLQIPA KPQQNQQQIS NNSSSSSSMS  60
PSSSEGDSPD SQDTSNTMLK YITEMLMDEG EDLKTKPCML LDCLALQAAE KSFYDVLGQK  120
YPPSPTGNGD SAQDFSSGNS SVLGLSENCV VGHDSFVGMQ YIGHFRQGVE EASKFLPVNG  180
TFGTIDLDND LCVSVPFKDV DVSRISGSLR DKKNRQREEE SDGELRSSKQ SATFADDNSL  240
SDLFDEVLLC RGESRQSPCG SDESSETEVN KKNSRGRRRK GKKTRSKKQD NSVGVVDLWT  300
LLTQCAQAIS NYDQRTANEL LNQIRQHSSP SGDGNQRLAH YFANGLETRL AAGTPLYMPF  360
ASNETSAAEI LKAFQMFIKA CPFRRMSYFY ANRTIMKLAE KETTLHIIDF GILYGLQWPC  420
LIQRLSRRPG GPPKVRITGI ELPQPGFRPA ERVEQTGRRL AHYCKRFNVP FEYKVLAQKW  480
ETVKYEDLNV NRDELTIVTC LFRLKNVPDE TVVANSPRDR VLKLIRKINP DLFIHEVMNG  540
SFNTPFFNTR FKEALFHYSS LFDMYEATMP RDIPERHLCE KEILGRDIVN VIACEGLERV  600
ERPETYKQWQ VRNTRAGFKQ VPLDQDLLKN VEKIVNTEYH QDFVIDQDGS WMLQGWKGRI  660
IYALSCWVVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G29060.10.0GRAS family protein