PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022964258.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 399aa    MW: 43912.6 Da    PI: 8.2353
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022964258.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP259.76.8e-19219268356
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 
                     ++GVr+++ +g+WvAeIr p++   r+r++lg+f+ta eAa a++ a+  l+ge
  XP_022964258.1 219 FRGVRQRH-WGKWVAEIRLPRN---RTRVWLGTFDTAVEAAIAYDTAAYMLRGE 268
                     8******9.**********955...5*************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 399 aa     Download sequence    
MADQFPLMEE LKNIIPKDIS SSSSSSFEEF VSGYYFHGDP ILWSSIARAS CSENGDSNGN  60
DQSKSPSSSS SSSSSFRLFS SEKSEISGGN LIENFRGIRK FESNLHPDGD GFVPVNFLEA  120
SPTLFQSRTD STNLTLFLQG SAIVDPSPRN PFQIQAQNGL QWLKNNQNQS QAAAIAAVSS  180
RNYSDFWLGT TKTQLMKQSG RKQGNHKTES TATAVGKLFR GVRQRHWGKW VAEIRLPRNR  240
TRVWLGTFDT AVEAAIAYDT AAYMLRGEFA HLNFPDQKHR LKSNSLNRTT AALLEAKLKT  300
ISQENTSRKK TATSTIAATT TIPTIDSSSS EKRSNLSQNP TRISPENMSG SGSNNGGSET  360
GELKRNPDEI FEIEQHLQLS TTPSLDMDTI WDALCGNLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13620.12e-52ERF family protein