PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022964056.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 283aa MW: 31585 Da PI: 7.6661

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022964056.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	132.7	1.3e-41	158	235	1	78
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +Cq+egC+adls+ak+yhrrhkvCe+hska++v+++gl+qrfCqqCsrfh l efD++krsCr+rLa+hn+rrrk+q+ XP_022964056.1 158 RCQAEGCNADLSQAKQYHRRHKVCEFHSKASTVITAGLTQRFCQQCSRFHVLAEFDNGKRSCRKRLADHNRRRRKTQQ 235 6**************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 283 aa Download sequence
MLEYEWGSTN APPILLPGDE SEPAFNPEAP HSHHLPTFID HHHHNTFFPT LTPPPFTTHF 60 GGFDDHPHSF IMGPSHHYDT VADAVHGGGV GGEEFVVVPK SEEVCRSITA VPVDFAARIG 120 LNLGGRTYFS SEEEEFVNQL YRRARTGGEP GSGNWSARCQ AEGCNADLSQ AKQYHRRHKV 180 CEFHSKASTV ITAGLTQRFC QQCSRFHVLA EFDNGKRSCR KRLADHNRRR RKTQQISNQG 240 SPKTQRLQTT TTTTSSTEQS AWSVTVAVSP AKMSLECLNQ RPY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G02065.1	4e-63	SBP family protein