PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022963271.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 505aa MW: 53512.3 Da PI: 8.5367

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022963271.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	56	78	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022963271.1 56 FVCEICNKGFQRDQNLQLHRRGH 78 89*******************88 PP
2	zf-C2H2	11.2	0.0012	132	154	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H + + XP_022963271.1 132 WKCDKCSKKYAVQSDWKAHSKIC 154 58*****************9876 PP

Sequence ? help Back to Top
Protein Sequence Length: 505 aa Download sequence
MSADVEDSSI ASIEGSVSSP GAKSATKKKR NLPGMPDPEA EVIALSPKTL LATNRFVCEI 60 CNKGFQRDQN LQLHRRGHNL PWKLRQRSSK EVKKKVYVCP ESSCVHHDPS RALGDLTGIK 120 KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFNRR DSFITHRAFC 180 DALAEERAKA QLKPVDKPDL DPDIGDSQTK VAKPNPEPSP PSPPPPSPPQ STAEPTTVLP 240 VPSQELPEIP LQYIEEAPGM AAATSGSSSS SSSSSNSSTR SSGFAGLFAS STTSISLQPP 300 RPPFTNLMQA MACSDRSSDY APSSTIEPIS LCLAMNQGPP MFGTASQDLR PYVPMPHPAM 360 SATALLQRAA QMGAAASSAS LLRGLGLVSS SSSAAQQESW PWNHQSQVEP DGVSIAAGLG 420 LGLPCDGNSG LKELIRGNHS MFAPKHTTLD FLGLGMAAGG SPNSGLAALI TSVGSSVDVA 480 TTAQSYPGGG GRGDISGRQD MNRSN

Sequence ? help Back to Top

Protein Sequence Length: 505 aa Download sequence

MSADVEDSSI ASIEGSVSSP GAKSATKKKR NLPGMPDPEA EVIALSPKTL LATNRFVCEI  60
CNKGFQRDQN LQLHRRGHNL PWKLRQRSSK EVKKKVYVCP ESSCVHHDPS RALGDLTGIK  120
KHFCRKHGEK KWKCDKCSKK YAVQSDWKAH SKICGTREYK CDCGTLFNRR DSFITHRAFC  180
DALAEERAKA QLKPVDKPDL DPDIGDSQTK VAKPNPEPSP PSPPPPSPPQ STAEPTTVLP  240
VPSQELPEIP LQYIEEAPGM AAATSGSSSS SSSSSNSSTR SSGFAGLFAS STTSISLQPP  300
RPPFTNLMQA MACSDRSSDY APSSTIEPIS LCLAMNQGPP MFGTASQDLR PYVPMPHPAM  360
SATALLQRAA QMGAAASSAS LLRGLGLVSS SSSAAQQESW PWNHQSQVEP DGVSIAAGLG  420
LGLPCDGNSG LKELIRGNHS MFAPKHTTLD FLGLGMAAGG SPNSGLAALI TSVGSSVDVA  480
TTAQSYPGGG GRGDISGRQD MNRSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-129	C2H2 family protein