PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962931.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family AP2
Protein Properties Length: 338aa    MW: 37260.4 Da    PI: 8.4608
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962931.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2513.7e-1697146155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ ++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  XP_022962931.1  97 SQYRGVTCYRRTGRWESHIWD------NgKQVYLGGFDTAHSAARAYDRAAIKFRG 146
                     78****99999**********......44************************997 PP
2AP242.12.2e-13189239155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s+y+GV+ +k  grW+A+   +     +k+++lg f+++ eAa+a+++a+ k +g
  XP_022962931.1 189 SKYRGVTLHK-CGRWEARMGQF--L-GKKYVYLGLFDSEVEAARAYDKAAIKHNG 239
                     89********.7******5553..2.26**********99**********99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 338 aa     Download sequence    
MLDLNLCILS GDSASASGSG SGSADHSNTT ADEDFSSNVN SGFTFSFSIL NNNGTDNQLD  60
RTALFHPVAG VCSQRKWLDQ SVNPVKKGRR GPKSRSSQYR GVTCYRRTGR WESHIWDNGK  120
QVYLGGFDTA HSAARAYDRA AIKFRGVHAD INFDIGDYRE EIKEMRNLSK EEFVHILRRQ  180
SNGFSRGSSK YRGVTLHKCG RWEARMGQFL GKKYVYLGLF DSEVEAARAY DKAAIKHNGR  240
EAVTNFDQSC YYGMEIAFES ESHGDIDLSL GIAPPCPPQH QTDNRSWPIP TPYGGASSLP  300
FFSAPAASSG FPSPALASPP SSTLTFPPLP HSPLYFRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28550.32e-91AP2 family protein