PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962678.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 295aa    MW: 33134.5 Da    PI: 10.4608
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962678.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B356.84.1e-1813103199
                     EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvk 95 
                     ffkv++ +d+++++ +++p  f ++  g    +++ t++d +g+sW v+l  +k +g +++++GW+ Fv+ + Lk gDf+vF +dg  +f++ vk
  XP_022962678.1  13 FFKVFL-PDSGSLH-MSIPPAFQKHLHGT--FPIKATIRDHTGKSWCVTL--EKVDGLVFFKNGWQAFVDYHCLKYGDFLVFGYDG--GFTFDVK 99 
                     788884.5777777.9******8555655..8999***************..****99*************************987..8888*** PP

                     EE-S CS
              B3  96 vfrk 99 
                     +f k
  XP_022962678.1 100 IFGK 103
                     9987 PP
2B336.77.2e-122042851394
                     TT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE..E-SS.SEE..EE CS
              B3  13 sgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk..ldgr.sefelvv 94 
                     ++ ++++ + +++ ++ k ++   +l+de+g+ W  k+  + +++r v  +GW+ F k ngL+++D + F+  l++   +++l+v
  XP_022962678.1 204 HKKVYISGRVVRDQNI-KLKP-NTVLRDEEGKLWPAKV-CSISQNRLVVNAGWSAFYKGNGLRVNDKCEFEfvLEKGnLCRQLNV 285
                     4556777777766633.3444.6789************.4788888*************************43332224455555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 295 aa     Download sequence    
MNPSIETASS LEFFKVFLPD SGSLHMSIPP AFQKHLHGTF PIKATIRDHT GKSWCVTLEK  60
VDGLVFFKNG WQAFVDYHCL KYGDFLVFGY DGGFTFDVKI FGKNGCKKAV VAEADNSVPI  120
LDSVLAIAGK SLPILKVKVE AVDEKEEVKP LISGKRKRLP VGSGIVHKPR RVPTRGRPGN  180
ASNIVEYVAP KGPSFERTMK HWSHKKVYIS GRVVRDQNIK LKPNTVLRDE EGKLWPAKVC  240
SISQNRLVVN AGWSAFYKGN GLRVNDKCEF EFVLEKGNLC RQLNVKVTHR RRSLR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66980.11e-39B3 family protein