PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022962651.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 495aa MW: 56505.8 Da PI: 4.4438 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 242.8 | 1.4e-74 | 125 | 489 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlsel.aspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 ++lLl++A+av+++++ l+++l+++l +l g +++++la +ft++L+ + ++ + ++ + e++++ +++l+a+ +++++sP++kf+ XP_022962651.1 125 TDLLLAAADAVDAQNHPLVSNLIQKLTNLlLCDMGsSSFNQLAWFFTQGLHYKTVG-YDIAAHE--MAEQDQTMNKNSLSAFLMLQQLSPYIKFA 216 689***********************99974444559******************9.3333333..333333358889999999*********** PP GRAS 95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189 h+taNqaIlea ege+++H+iDfdi++G+QWp+L+ La++ ++ lR+T++++ ++++++++eetg+rL++fA+++++pf+f+ + + +d XP_022962651.1 217 HFTANQAILEASEGEKMIHVIDFDIMEGIQWPPLMADLAAK-KQVCLLRLTAIEQGNENEQRRIEETGRRLSEFAKSINLPFKFDHMGIE--KDE 308 ****************************************8.5669*********9999**************************97555..455 PP GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqe....adhnsesFlerflealeyysalfdsleaklpr..e 278 ++e+++v g +++ n++ lh+l + +s+ +++L+ v +lsPk vv+ve+e ++ + sF+e f+ea++++s+l dsl ++ e XP_022962651.1 309 NFEQIQVL-GQTVIANCSGILHSLS---HRNSSKLETFLNGVAKLSPKCVVLVEEElfkvSKAQPMSFVEFFFEAFHHFSSLSDSLLRCFSGvyE 399 66888765.889999*********8...445555679*******************65533335569*******************555443114 PP GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerlee.aGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSa 372 + +++++++ lg +i + v++ e ++ ++ +++++ G+k++p+s+++ +qak+l+ + +d + v++e+gsl l+Wk+rpL s++ XP_022962651.1 400 NGFKQVMDEF-LGTRILESVSQFPCE----KNAMNLREKAFDYfKGYKKIPFSSFNCSQAKYLITLFRGD-FWVQHENGSLSLCWKSRPLCSATI 488 4666777776.**********99998....333333455666646***********************88.************************ PP GRAS 373 W 373 W XP_022962651.1 489 W 489 * PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 495 aa Download sequence |
MNTMELEPID FLTNYSYFSQ QSHEFGECSL TNSCSSLSEN SSQNSLQDGY FLEYADQNLL 60 QQELDQFDPI NYNFEDFLAT TMDHQSIPEM GDSRSVQEDE EEEEENSKTM FKGIQAELME 120 EESLTDLLLA AADAVDAQNH PLVSNLIQKL TNLLLCDMGS SSFNQLAWFF TQGLHYKTVG 180 YDIAAHEMAE QDQTMNKNSL SAFLMLQQLS PYIKFAHFTA NQAILEASEG EKMIHVIDFD 240 IMEGIQWPPL MADLAAKKQV CLLRLTAIEQ GNENEQRRIE ETGRRLSEFA KSINLPFKFD 300 HMGIEKDENF EQIQVLGQTV IANCSGILHS LSHRNSSKLE TFLNGVAKLS PKCVVLVEEE 360 LFKVSKAQPM SFVEFFFEAF HHFSSLSDSL LRCFSGVYEN GFKQVMDEFL GTRILESVSQ 420 FPCEKNAMNL REKAFDYFKG YKKIPFSSFN CSQAKYLITL FRGDFWVQHE NGSLSLCWKS 480 RPLCSATIWV PTAKI |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G08250.1 | 2e-34 | GRAS family protein |