PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022962492.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family DBB
Protein Properties Length: 278aa    MW: 29684.8 Da    PI: 6.03
Description DBB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022962492.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-B_box24.45.8e-08443538
        zf-B_box  5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38
                     C+ +e+ e+  fC+ ++  lC+ C    H+       H+
  XP_022962492.1  4 LCDVCENAEAVVFCTADEAALCNLCDHRVHNAnklaskHR 43
                    7*****************************7667777776 PP
2zf-B_box23.98.4e-085495237
        zf-B_box  2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37
                    e+++C+ + e +  lfC++++  lC++C + +H+       H
  XP_022962492.1 54 EAPVCDVCRERRGFLFCQQDRAILCRECDDPIHSAneltmkH 95
                    6799*******9*********************655555555 PP
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    
MKILCDVCEN AEAVVFCTAD EAALCNLCDH RVHNANKLAS KHRRFSLLRS DAAEAPVCDV  60
CRERRGFLFC QQDRAILCRE CDDPIHSANE LTMKHDRFLQ IGIKLSATAT LYEPPPSGEK  120
LIGSGGCVVS KSKLKGSVKK AAAVSSAPTV CTTSVCVNAP TNLTPTTAVN EGGGGQIATE  180
GGGSASSISE YLMETLPGWP FEEFLEFEGV GFPLSSWEGL EPWVPQGPPA ALFGLKDTKA  240
LVVNSSKVNR VWTDDGFTVP QIISTTPSAG FKGSRPFS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75540.15e-53DBB family protein