PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961793.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 627aa MW: 67112 Da PI: 6.8362

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961793.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	22.2	3.3e-07	199	243	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l avk+ G g+W+ I r + Rt+ q+ rw XP_022961793.1 199 RKPWSEAEDLELMAAVKKCGEGNWANIIRgdFLS-DRTASQLSQRW 243 789**********************996521344.66666666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 627 aa Download sequence
MKLQKRSLNE NDVSTILRRY SPTTVLALLQ EVAQVPEAKI EWKELVKNTS TGISNPREYQ 60 MLWRHLAYRH ALLDNLEDEK APLEDDSDLE CDLEPFPSVS CETLTEAAAC AKVFISSGSS 120 SDLNVPSSST IEAPLTISLP RSYRDGVQFE NVDPACSIKG ASITVPVSVQ RQPVLTPPSV 180 EGLNANGSTY GNNASRRKRK PWSEAEDLEL MAAVKKCGEG NWANIIRGDF LSDRTASQLS 240 QRWAIIKKKH GNLTVGANTA GTHLSEVQLA ARHAMSLALD RHVVGSLKAA RISGSASTNK 300 IGNGSSLAAV PTSEQVQDKL HQSPTHTKPS PIGSSSLTAK AQVTTSKKMI PKSSFDSDCI 360 VRAAAVAAGA RIASPADAAS LLKAAQSKNV IHITAKIPAS TKTPTPGRGS NHLEAHPSIK 420 TTTLSNTPAV MPSLSRGVPV KTTSLQTATL SSVPTDQNIA VASVTAAADP LSEKEIKTVE 480 DVRGRGLGGV QTTFQKNDHC LSRESLSERV IDEKPADLGP ALKRQTTETN SCSSSSQNMP 540 TADGYIKVET CNQVEERQNS NTSAVPDSSD QQEIMNQSQV ERSKPQDMDV DSDGKDTPIT 600 KADGRSENSE HKEDVNEILE GNTAVKS

Sequence ? help Back to Top

Protein Sequence Length: 627 aa Download sequence

MKLQKRSLNE NDVSTILRRY SPTTVLALLQ EVAQVPEAKI EWKELVKNTS TGISNPREYQ  60
MLWRHLAYRH ALLDNLEDEK APLEDDSDLE CDLEPFPSVS CETLTEAAAC AKVFISSGSS  120
SDLNVPSSST IEAPLTISLP RSYRDGVQFE NVDPACSIKG ASITVPVSVQ RQPVLTPPSV  180
EGLNANGSTY GNNASRRKRK PWSEAEDLEL MAAVKKCGEG NWANIIRGDF LSDRTASQLS  240
QRWAIIKKKH GNLTVGANTA GTHLSEVQLA ARHAMSLALD RHVVGSLKAA RISGSASTNK  300
IGNGSSLAAV PTSEQVQDKL HQSPTHTKPS PIGSSSLTAK AQVTTSKKMI PKSSFDSDCI  360
VRAAAVAAGA RIASPADAAS LLKAAQSKNV IHITAKIPAS TKTPTPGRGS NHLEAHPSIK  420
TTTLSNTPAV MPSLSRGVPV KTTSLQTATL SSVPTDQNIA VASVTAAADP LSEKEIKTVE  480
DVRGRGLGGV QTTFQKNDHC LSRESLSERV IDEKPADLGP ALKRQTTETN SCSSSSQNMP  540
TADGYIKVET CNQVEERQNS NTSAVPDSSD QQEIMNQSQV ERSKPQDMDV DSDGKDTPIT  600
KADGRSENSE HKEDVNEILE GNTAVKS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	3e-71	MYB_related family protein