PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022961085.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRAS | ||||||||
Protein Properties | Length: 617aa MW: 67383.2 Da PI: 5.3828 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 449.8 | 1.8e-137 | 243 | 609 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 lv++L++cAeav++++++ a+al++++ la +++ +m+++a+yf+eALa+r++r +y+ +s s+ l++ f+e++P+lkf+h XP_022961085.1 243 LVHTLMACAEAVQQENMKIAEALVKHIGLLAVSQAGAMRKVATYFAEALARRIYR----IYSPQDGFYSS---YSDILQM--HFYETCPYLKFAH 328 689****************************************************....77544444443...4444443..5************ PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg.skeeleetgerLakfAeelgvpfefnvlvakrledl 189 +taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp++R+Tg+g+p++g +++l+++g++La++A ++gv+fefn +v+++l++l XP_022961085.1 329 FTANQAILEAFATASRVHVIDFSLNQGMQWPALMQALALRPGGPPTFRLTGIGPPKQGnTTDSLQQVGWKLAQMAGAIGVEFEFNQIVCSNLANL 423 ********************************************************99999********************************** PP GRAS 190 eleeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres..e 280 ++ +L+++p Ea+aVn+v+ lhrll++++++e+ vL +k ++Pk+v++veqea+hn+ F++rf+eal+yys +fdsle++ + + XP_022961085.1 424 NPAALEIRPaaVEAVAVNSVFDLHRLLARPGAIEK----VLGSIKATKPKIVTIVEQEANHNGRVFMDRFTEALHYYSNMFDSLEVSSTGFEpaS 514 *********999***********************....*********************************************87754333459 PP GRAS 281 erikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374 e++ +++++lgr+i+nvvaceg +r+erhe+l +Wr r+e+aGF+pv+l+++a kqa++ll+ ++ ++gyrvee++g+l+lgW++rpL+++SaW+ XP_022961085.1 515 EDVLLSEVYLGRQICNVVACEGPDRVERHESLTHWRTRMESAGFNPVHLGSNAFKQASMLLALFAgGEGYRVEENNGCLMLGWHTRPLIATSAWQ 609 9*********************************************************************************************6 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 617 aa Download sequence |
MKMKMKMKMK RELEDDRSTG GGVYGGGRQG VGKGECSSVS GGKVKMWEEE EQEVGGGGMD 60 ELLAVLGYKV RASDMADVAQ KMEQLEMVMG SVKEDGISHL ASDTVHYNPS DLSAWIQNML 120 SEFNNTPNHF NSSSTSTTPP PQSSQYSNPH SRIQSRPSRL YDDDSEYDLS AIPGVAVFPS 180 KDSSTEIETN SRKRVKIEGE SSVNLLPPSP PFVAAAAAAG IVSEPSRPVV VVEEGSQDAG 240 IQLVHTLMAC AEAVQQENMK IAEALVKHIG LLAVSQAGAM RKVATYFAEA LARRIYRIYS 300 PQDGFYSSYS DILQMHFYET CPYLKFAHFT ANQAILEAFA TASRVHVIDF SLNQGMQWPA 360 LMQALALRPG GPPTFRLTGI GPPKQGNTTD SLQQVGWKLA QMAGAIGVEF EFNQIVCSNL 420 ANLNPAALEI RPAAVEAVAV NSVFDLHRLL ARPGAIEKVL GSIKATKPKI VTIVEQEANH 480 NGRVFMDRFT EALHYYSNMF DSLEVSSTGF EPASEDVLLS EVYLGRQICN VVACEGPDRV 540 ERHESLTHWR TRMESAGFNP VHLGSNAFKQ ASMLLALFAG GEGYRVEENN GCLMLGWHTR 600 PLIATSAWQL DADESTQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 0.0 | GRAS family protein |