PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022960353.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

DBB

Protein Properties

Length: 237aa MW: 26208.9 Da PI: 4.7196

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022960353.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	23.7	9.9e-08	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++l C ++ lC++C +e H H++ XP_022960353.1 4 QCDVCEKAPATLICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	30.2	9.6e-10	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ +++k++ +fC +++ l+C+dC + +H+ H XP_022960353.1 53 KLPKCDICQDKPAFIFCVEDRALFCQDCDEPIHSTgslsanH 94 5799*****************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 237 aa Download sequence
MKIQCDVCEK APATLICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCL STKLPKCDIC 60 QDKPAFIFCV EDRALFCQDC DEPIHSTGSL SANHQRFLAT GIRVAMSSSC TKDVDKVKME 120 PPNPKNPQVP AKMPSQQVPN FTSPWAVDDF LHFSDLESSD KQKEDLEFGE LEWLAEMGLF 180 GEHVPQEALA AAEVPELPTS HSGSAFAYRP TKSSMSYKKP RIEVVDEDEF FTVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	2e-96	DBB family protein