PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022960205.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 452aa    MW: 51703.8 Da    PI: 5.1955
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022960205.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS313.16.3e-96644513374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     +lL +cA+a+s++d +++++lL+ l+elasp+gd+ q+la yf++AL  r ++++ ++yk+l + ++++++ +++l+    f+evsP+++f+h++
  XP_022960205.1  64 TLLNDCARAISDKDSNKIHHLLWMLNELASPYGDSDQKLAYYFLQALFCRATETGLTCYKTLVTVSEKNYSFDSALKLILKFQEVSPWMTFGHVA 158
                     6899**********************************************************9999998888888888888************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvl.vakrledlel 191
                      N aIlea+e+e+++HiiD++ + ++QWp+Ll++La+R++++p+l++T+v+  +++ k  + e+g+r++kfA+ +gvpfefn++   ++l+dle 
  XP_022960205.1 159 SNGAILEALERETKLHIIDISDTLCTQWPTLLESLATRNDDTPHLKLTVVST-TTKVKSLMMEIGQRMEKFARLMGVPFEFNPItNLNQLSDLEN 252
                     ****************************************************.5567888999********************95556******* PP

            GRAS 192 eeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh..nsesFlerflealeyysalfdsleaklpreseerik 284
                     e+L+v+++Ea+a+n+  +l ++      +e+ r++v++++ksl+P+v+++ve+ead   ++++F+  f e+l++y+  f++le+++ ++s+e+  
  XP_022960205.1 253 EALKVEEDEAIAINCNGALRTIK-----IEE-RNAVISMLKSLKPRVLTIVEEEADFlsSKNEFMSCFDECLRFYTLYFEMLEESFEATSNEKLG 341
                     ********************997.....555.89**********************9867889******************************** PP

            GRAS 285 vErellgreivnvvacegae...r...rerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee................sgs 357
                     +Ere  +r+iv v+ c +++   r    er+e+ ++W+erlee GF ++++s+++++++k+ll+++k  g+ + ++                s  
  XP_022960205.1 342 LERE-CSRNIVRVLGCGNESeleReltSERREKGKQWSERLEERGFLSARFSDDVMDDVKALLKRYK-PGWALMHRtgaidtnrdeeeggddSSG 434
                     ****.89********9766422232226899************************************.666666333444455556667775778 PP

            GRAS 358 lvlgWkdrpLvsvSaWr 374
                     ++l+Wk+ p+v++SaW+
  XP_022960205.1 435 IYLTWKEVPMVWISAWK 451
                     88**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 452 aa     Download sequence    
MDITLFTAKE APTIFFSESH DHRHCHRLHR VRFPNLAMQS SISQSSKYSL DHSPPAAAGK  60
WASTLLNDCA RAISDKDSNK IHHLLWMLNE LASPYGDSDQ KLAYYFLQAL FCRATETGLT  120
CYKTLVTVSE KNYSFDSALK LILKFQEVSP WMTFGHVASN GAILEALERE TKLHIIDISD  180
TLCTQWPTLL ESLATRNDDT PHLKLTVVST TTKVKSLMME IGQRMEKFAR LMGVPFEFNP  240
ITNLNQLSDL ENEALKVEED EAIAINCNGA LRTIKIEERN AVISMLKSLK PRVLTIVEEE  300
ADFLSSKNEF MSCFDECLRF YTLYFEMLEE SFEATSNEKL GLERECSRNI VRVLGCGNES  360
ELERELTSER REKGKQWSER LEERGFLSAR FSDDVMDDVK ALLKRYKPGW ALMHRTGAID  420
TNRDEEEGGD DSSGIYLTWK EVPMVWISAW KP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37650.11e-131GRAS family protein