PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022959998.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 276aa MW: 29798.4 Da PI: 8.5281

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022959998.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.5	2.4e-38	49	156	2	109
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssaseceaesssssasnsssgkaaksaak 96 a+k+++++++h kv+gR+RR+R++a+caar+F+L++eLG+++d++ti+WLlqqa+p+i+++tg+++++as+ a+ s+s+++ s+++a + + XP_022959998.1 49 APKRTSNKDRHKKVDGRGRRIRMPALCAARVFQLTRELGHKTDGETIQWLLQQAEPSIIAATGSGTIPASALHAAGVSVSDQETSISAALTPKLD 143 789******************************************************************99977777777777777755555555 PP TCP 97 skksqksaasaln 109 + +++ a n XP_022959998.1 144 GVARPNWAMMGAN 156 5555555544444 PP

Sequence ? help Back to Top
Protein Sequence Length: 276 aa Download sequence
MAEHNKKKPS PPASTPTTIT PPPPPSADIK DFNIIIASKD ENKHHQQLAP KRTSNKDRHK 60 KVDGRGRRIR MPALCAARVF QLTRELGHKT DGETIQWLLQ QAEPSIIAAT GSGTIPASAL 120 HAAGVSVSDQ ETSISAALTP KLDGVARPNW AMMGANLNRS HMATAGFWPS LGGIGTGFVS 180 ENSGSIMPKF GFHGFEFQGM NLGSMNFPTI IGNQHQQHVP GLELGLSQEG NNLRGMLNPP 240 SYSQIYHQIE QNRDSSGGGS LEQDQAPEKD DSEQSR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G27010.1	3e-68	TCP family protein