PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022959481.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TCP

Protein Properties

Length: 414aa MW: 44598.3 Da PI: 8.8383

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022959481.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	120.1	2.7e-37	135	242	3	101
TCP 3 gkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec.........eaesssssasnsssg 88 +k+ +++++hTkv+gR+RR+R++a+caar+F+L++eLG+++d++ti WLl+ a+pai+++tgt++ +a ++ ++ sss+++s+++s+ XP_022959481.1 135 PKRPSTKDRHTKVEGRGRRIRIPATCAARIFQLTRELGHKSDGETIRWLLERAEPAIIAATGTGTVPAIAMsvngtlkipTTTSSSNQDSTDQSA 229 7999***********************************************************88888443323334432222222332222222 PP TCP 89 kaaksaakskksq 101 ++++ + + +++ XP_022959481.1 230 SKKRRKRPANSDY 242 2222222222222 PP

Sequence ? help Back to Top
Protein Sequence Length: 414 aa Download sequence
MGMASWELLE EEKVMGVGPS SPALTQHYWA PPFFGNSSFF SQFLLFLSLN PLSPLLPLPS 60 PLSPPPSPPM ADIHKQDLDD HHHSPPTHLS INNSDSSPMN LLPLAPKREH PDNDHETQVV 120 KFTAEIPKTV SSIPPKRPST KDRHTKVEGR GRRIRIPATC AARIFQLTRE LGHKSDGETI 180 RWLLERAEPA IIAATGTGTV PAIAMSVNGT LKIPTTTSSS NQDSTDQSAS KKRRKRPANS 240 DYVDVNDAVS VSVSASASAS ASNGCVQAAT VAGSPAVQQP FPPGFVPVWA IPSNAIIPGA 300 VFMVPSVDCS STRPQFFSFP TPAAPLINTT ARPISTVPSK LHTSHIQANT TNQSSSTSNS 360 SASKSESVMA PISSSTVTTN GKTTKQMLRE FSLEIYDKEE LQFMSRSSER MKTE

Sequence ? help Back to Top

Protein Sequence Length: 414 aa Download sequence

MGMASWELLE EEKVMGVGPS SPALTQHYWA PPFFGNSSFF SQFLLFLSLN PLSPLLPLPS  60
PLSPPPSPPM ADIHKQDLDD HHHSPPTHLS INNSDSSPMN LLPLAPKREH PDNDHETQVV  120
KFTAEIPKTV SSIPPKRPST KDRHTKVEGR GRRIRIPATC AARIFQLTRE LGHKSDGETI  180
RWLLERAEPA IIAATGTGTV PAIAMSVNGT LKIPTTTSSS NQDSTDQSAS KKRRKRPANS  240
DYVDVNDAVS VSVSASASAS ASNGCVQAAT VAGSPAVQQP FPPGFVPVWA IPSNAIIPGA  300
VFMVPSVDCS STRPQFFSFP TPAAPLINTT ARPISTVPSK LHTSHIQANT TNQSSSTSNS  360
SASKSESVMA PISSSTVTTN GKTTKQMLRE FSLEIYDKEE LQFMSRSSER MKTE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	231	235	KKRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45680.1	2e-58	TCP family protein