PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958531.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 688aa MW: 77145 Da PI: 10.1548

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958531.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.7	1.3e-08	10	62	2	47
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.......TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmg.......kgRtlkqcksrwqky 47 ++W t E++ll+ av+++G+ +W+++a ++ +t+ +c+ +++++ XP_022958531.1 10 KPWGTLEELLLASAVNRHGTTSWESVAMEIHnrcsqssSSLTPQDCRIKFHDL 62 69*****************************7777777777777777777765 PP

Sequence ? help Back to Top
Protein Sequence Length: 688 aa Download sequence
MVEQRETNTK PWGTLEELLL ASAVNRHGTT SWESVAMEIH NRCSQSSSSL TPQDCRIKFH 60 DLKRRFLSQN DLDSDSTSLM PMLDELRKIR VEELRRDVQR RDVLIVSLEM KVKRLEEERE 120 RSFNEPDGGP DLDVNAIDTN LCPLNPTPSG DDSDDRENRS LDESNSTSKK EEGVGQKGVV 180 RERPISETMK ITKKKETGAA RTGDEPEAER EKETAAGGGY KRREKKERNW GNSKGKASAV 240 GDSNEAWESV SESKQEGKEG AVAKQQSSDV QSSAGLSQRK RCRSRGGNGT SSGEEPEVSP 300 AKPKPKPNSK SKPNPKPNSN PAAVKSEPLL KFLEIIRSHR LGSAFERRLR SQESDRYKKL 360 IRQHIDLRTI HSRVVKGAYA DSIHRFFRDL LLLFNNAVIF FHRSSPENGA AVKLRALVLK 420 EMKDRIRKPQ PPIVTKSKPK QEADVSSSKP SKPSTTMVVC RKRDSVSQIS DVGGKKSENN 480 SREGEGKRKG NDCSEIKIYE KGTWKKGLNL KERGRAGVGN SGARSCRTTT NKKNGEVKHE 540 YGGNELSSHD GMGVRIEKKE KGTKKKQVAV RFLKRMKQNS PSEATDEDGD GSEDESLKEE 600 EEEDEEEEEE EEEEEEEEEE EKKRKIKKQN EGKRERGRRS GGGGGGRGGG RGKRGVGRPP 660 KKAETVSVKR QQREEVVGGS KPRKRSRR

Sequence ? help Back to Top

Protein Sequence Length: 688 aa Download sequence

MVEQRETNTK PWGTLEELLL ASAVNRHGTT SWESVAMEIH NRCSQSSSSL TPQDCRIKFH  60
DLKRRFLSQN DLDSDSTSLM PMLDELRKIR VEELRRDVQR RDVLIVSLEM KVKRLEEERE  120
RSFNEPDGGP DLDVNAIDTN LCPLNPTPSG DDSDDRENRS LDESNSTSKK EEGVGQKGVV  180
RERPISETMK ITKKKETGAA RTGDEPEAER EKETAAGGGY KRREKKERNW GNSKGKASAV  240
GDSNEAWESV SESKQEGKEG AVAKQQSSDV QSSAGLSQRK RCRSRGGNGT SSGEEPEVSP  300
AKPKPKPNSK SKPNPKPNSN PAAVKSEPLL KFLEIIRSHR LGSAFERRLR SQESDRYKKL  360
IRQHIDLRTI HSRVVKGAYA DSIHRFFRDL LLLFNNAVIF FHRSSPENGA AVKLRALVLK  420
EMKDRIRKPQ PPIVTKSKPK QEADVSSSKP SKPSTTMVVC RKRDSVSQIS DVGGKKSENN  480
SREGEGKRKG NDCSEIKIYE KGTWKKGLNL KERGRAGVGN SGARSCRTTT NKKNGEVKHE  540
YGGNELSSHD GMGVRIEKKE KGTKKKQVAV RFLKRMKQNS PSEATDEDGD GSEDESLKEE  600
EEEDEEEEEE EEEEEEEEEE EKKRKIKKQN EGKRERGRRS GGGGGGRGGG RGKRGVGRPP  660
KKAETVSVKR QQREEVVGGS KPRKRSRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G57980.1	7e-57	MYB_related family protein