PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022958485.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | TALE | ||||||||
Protein Properties | Length: 619aa MW: 68078.1 Da PI: 7.4198 | ||||||||
Description | TALE family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Homeobox | 27.5 | 5.5e-09 | 387 | 424 | 19 | 54 |
HHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 19 Fek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 Fe ++yp+ +++ LAk++gLt +qV++WF N R + XP_022958485.1 387 FEHflHPYPKDSDKVILAKQTGLTRSQVSNWFINARVR 424 554459******************************88 PP | |||||||
2 | BELL | 113.1 | 1.5e-36 | 251 | 322 | 1 | 72 |
BELL 1 erqelqkkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiaeqi 72 +rq+lq+kkakL+ +l+eV+++Y+qy++q+q+v+ sFe++aglgsak Y+slAl++iS++FrcLkdai+ q+ XP_022958485.1 251 QRQDLQMKKAKLIGMLDEVEQKYRQYHQQMQAVACSFEQAAGLGSAKCYASLALQTISKQFRCLKDAICAQV 322 699*******************************************************************97 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 619 aa Download sequence |
MATYFHGGSE IQASSDGIHT LYLMNPNYVP YSDTHSQTPP NMLFLNPSTH ALTPSTLPHA 60 PPSTNHFVGI PLPATDTSRP SYHEISALHS VPAQRLHYNL WAPMDQISSV SAATDSTDLS 120 FRRPRTHQGL SLSLSSQQSL YRTMSADQEI QGGRGGGAPD ISPTSGDEIR VSGNSPASAS 180 VSVVSSGVTG SKYLKAAQEL LDEVVNVGNG NKTDKGDKMK MKKESTAAIA EPSGGGAEST 240 SKPVTELSTA QRQDLQMKKA KLIGMLDEVE QKYRQYHQQM QAVACSFEQA AGLGSAKCYA 300 SLALQTISKQ FRCLKDAICA QVKASGKSLG EEDWSGGKIE GSRLRYVDHH VRQQRALQQL 360 GMIQHNTWRP QRGLPERAVS VLRAWLFEHF LHPYPKDSDK VILAKQTGLT RSQVSNWFIN 420 ARVRLWKPMV EEMYSEEIKE QEQNSDSHDM NRHNKNEPNK QNHQIMNDSL TDQVPNSLQT 480 HSGFNLVRPS SDMLSCPKRQ RTTNNLETPS TKPTLSRDIN DTKHVHGGGF GSYPIDEIGT 540 RFNSELLTPR FHANGVSLTL GLPQTYLSDP NLQLGTRVDI TNGGSDFSDI DPAPATAYDG 600 VEIQTTKRFA AQLLPDFVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G35940.1 | 1e-125 | TALE family protein |