PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022958219.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 492aa MW: 55137.9 Da PI: 7.5753

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022958219.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	53.9	3e-17	22	81	2	57
T--SS--HHHHHHHHHHHH....HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 2 rkRttftkeqleeLeelFe....knrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 +kR t++q+ +Le++++ +++yp++e++ +LA++lgLte+q++ WF+ rR k+k+ XP_022958219.1 22 KKRKLKTPTQVIALEKFYNvpipEHKYPTEEMKSQLAEQLGLTEKQISGWFCHRRLKDKR 81 89***************99999********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 492 aa Download sequence
MEEELGHVMH SEENKDSTEK NKKRKLKTPT QVIALEKFYN VPIPEHKYPT EEMKSQLAEQ 60 LGLTEKQISG WFCHRRLKDK RFCETYPSVR QDRSSGFIQD LGSGLAQDSC GSTKNGDYWY 120 IDPREVESQK PYGHELATDN VLERRSQYTE NVSNMDNTPS ESSSSLKDRV LSQSENPYDT 180 EVSQYLTHEG AIPSSNPKAL NSLRYKPSGY LKVKGEAENA AITAVKRQLG VQYREDGPPL 240 GVEFQPLPPD SYYTGNPILP RSPEISTTKK QRALGSRYEV HSSNMSSQDS YMEEAVPTSA 300 TCRPECHDKN SMNQLKKGSN YYNKTDPFPR PNSPLNMYEE SGGLTLSSSS KRDHRINSSY 360 NIPSSRSDSV SNNHGSCSSK VANEQTEMQL HNHGCVGSKS FYRSGKTMPK EMFNGEENTV 420 NGSSDPVRGK ILPTKEMAVA NRCPLDFPRS NYAAKSSFSG KPGRKNHARR STTEMPYSFT 480 VGEAEDTSSS LD

Sequence ? help Back to Top

Protein Sequence Length: 492 aa Download sequence

MEEELGHVMH SEENKDSTEK NKKRKLKTPT QVIALEKFYN VPIPEHKYPT EEMKSQLAEQ  60
LGLTEKQISG WFCHRRLKDK RFCETYPSVR QDRSSGFIQD LGSGLAQDSC GSTKNGDYWY  120
IDPREVESQK PYGHELATDN VLERRSQYTE NVSNMDNTPS ESSSSLKDRV LSQSENPYDT  180
EVSQYLTHEG AIPSSNPKAL NSLRYKPSGY LKVKGEAENA AITAVKRQLG VQYREDGPPL  240
GVEFQPLPPD SYYTGNPILP RSPEISTTKK QRALGSRYEV HSSNMSSQDS YMEEAVPTSA  300
TCRPECHDKN SMNQLKKGSN YYNKTDPFPR PNSPLNMYEE SGGLTLSSSS KRDHRINSSY  360
NIPSSRSDSV SNNHGSCSSK VANEQTEMQL HNHGCVGSKS FYRSGKTMPK EMFNGEENTV  420
NGSSDPVRGK ILPTKEMAVA NRCPLDFPRS NYAAKSSFSG KPGRKNHARR STTEMPYSFT  480
VGEAEDTSSS LD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G03250.1	7e-83	HB-other family protein