PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022957350.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 314aa MW: 35954.1 Da PI: 8.3212 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.8 | 4.3e-06 | 21 | 41 | 3 | 23 |
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C+ Cg F+ + +Lk+H+++H XP_022957350.1 21 CQECGAEFKKPAYLKQHMQSH 41 *******************99 PP | |||||||
2 | zf-C2H2 | 15.1 | 6.9e-05 | 47 | 71 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C s++rk++L+rH+ H XP_022957350.1 47 YICSidGCEASYRRKDHLTRHLLHH 71 899999***************9987 PP | |||||||
3 | zf-C2H2 | 21.4 | 6.4e-07 | 114 | 138 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk+F+ s+L++H +H XP_022957350.1 114 FVCPedGCGKVFRYASQLQKHEHSH 138 89*******************9888 PP | |||||||
4 | zf-C2H2 | 19.7 | 2.2e-06 | 207 | 230 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 C+ C+k+Fs+ snL++H+++ H XP_022957350.1 207 CTheGCSKVFSTISNLHQHMKVvH 230 88889****************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MESGKHNDGG DKTINGKSNI CQECGAEFKK PAYLKQHMQS HSLERPYICS IDGCEASYRR 60 KDHLTRHLLH HQGLIIKCPI EGCSREFAYI SCVNRHLKEC HEGGAPPEEC QKQFVCPEDG 120 CGKVFRYASQ LQKHEHSHFK LDSIEACCAE PGCMKTFTNK KCLQAHMQSF HQYINCEICG 180 EKKLRKNMKQ HLRQKHESEG PPEAIPCTHE GCSKVFSTIS NLHQHMKVVH LGQKPFACGF 240 PGCGMRFGYK HVRDNHEKKG QHVYTNGDFE AADEQFRSKP RGGRKRIRPT VEMLIRKRIT 300 PPSELDFITM DEEC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.2 | 1e-119 | C2H2 family protein |