PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957230.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 451aa MW: 50755.8 Da PI: 8.2942

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957230.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.6	9.7e-40	150	226	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ d+s++k+y+r+h+vCe hsk+p+v++ g e+rfCqqCsrfh++sefD +krsCrrrL++hn+rrrk+q+ XP_022957230.1 150 CQVEGCNIDISNVKDYYRKHRVCESHSKSPKVIIGGFERRFCQQCSRFHSISEFDGKKRSCRRRLSNHNARRRKPQS 226 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 451 aa Download sequence
MEWNARPPLQ WDWDNLTVLN PRYSEHAGDD RTTGGPFFKL GQTSPKISKS VSTNSSSFEK 60 SRTTKFTLEG FEPTLEDSCN KKEFVEAEVV STYGTPETST CSCEPMLSLK LGKQAYFENA 120 SAVNLTKPSA LMVESRATRK RGQNTPSAHC QVEGCNIDIS NVKDYYRKHR VCESHSKSPK 180 VIIGGFERRF CQQCSRFHSI SEFDGKKRSC RRRLSNHNAR RRKPQSKVVS LNPARLSSWD 240 FENRQIDIFS DKLSLIYPTP NEKSAWESAF SSRHPQCGKY ISKPEPTYGS IGQLNVSGDE 300 MCYVHAMPYH DNTSKAVPFK GAATKILDPE GYVIPSDLNS AQDLQRALSL LSTDTKGPYE 360 ARLFAPDNPN RLVNPNYANQ PSISQSPLNL EIQTLPFASV DSQSWGNGHH HPIELQMQIH 420 HPNIEGGNNL FQDFQVFKTP CEIGMFSNQI S

Sequence ? help Back to Top

Protein Sequence Length: 451 aa Download sequence

MEWNARPPLQ WDWDNLTVLN PRYSEHAGDD RTTGGPFFKL GQTSPKISKS VSTNSSSFEK  60
SRTTKFTLEG FEPTLEDSCN KKEFVEAEVV STYGTPETST CSCEPMLSLK LGKQAYFENA  120
SAVNLTKPSA LMVESRATRK RGQNTPSAHC QVEGCNIDIS NVKDYYRKHR VCESHSKSPK  180
VIIGGFERRF CQQCSRFHSI SEFDGKKRSC RRRLSNHNAR RRKPQSKVVS LNPARLSSWD  240
FENRQIDIFS DKLSLIYPTP NEKSAWESAF SSRHPQCGKY ISKPEPTYGS IGQLNVSGDE  300
MCYVHAMPYH DNTSKAVPFK GAATKILDPE GYVIPSDLNS AQDLQRALSL LSTDTKGPYE  360
ARLFAPDNPN RLVNPNYANQ PSISQSPLNL EIQTLPFASV DSQSWGNGHH HPIELQMQIH  420
HPNIEGGNNL FQDFQVFKTP CEIGMFSNQI S

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	206	223	KKRSCRRRLSNHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	4e-45	SBP family protein