PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957225.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

SBP

Protein Properties

Length: 473aa MW: 53104.4 Da PI: 8.2975

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957225.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	126.5	1e-39	172	248	2	78
-SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 CqvegC+ d+s++k+y+r+h+vCe hsk+p+v++ g e+rfCqqCsrfh++sefD +krsCrrrL++hn+rrrk+q+ XP_022957225.1 172 CQVEGCNIDISNVKDYYRKHRVCESHSKSPKVIIGGFERRFCQQCSRFHSISEFDGKKRSCRRRLSNHNARRRKPQS 248 **************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 473 aa Download sequence
MEWNARPPLQ WDWDNLTVLN PRYSEHGDVL HPTIFQTKHG INFGPSNSAG DDRTTGGPFF 60 KLGQTSPKIS KSVSTNSSSF EKSRTTKFTL EGFEPTLEDS CNKKEFVEAE VVSTYGTPET 120 STCSCEPMLS LKLGKQAYFE NASAVNLTKP SALMVESRAT RKRGQNTPSA HCQVEGCNID 180 ISNVKDYYRK HRVCESHSKS PKVIIGGFER RFCQQCSRFH SISEFDGKKR SCRRRLSNHN 240 ARRRKPQSKV VSLNPARLSS WDFENRQIDI FSDKLSLIYP TPNEKSAWES AFSSRHPQCG 300 KYISKPEPTY GSIGQLNVSG DEMCYVHAMP YHDNTSKAVP FKGAATKILD PEGYVIPSDL 360 NSAQDLQRAL SLLSTDTKGP YEARLFAPDN PNRLVNPNYA NQPSISQSPL NLEIQTLPFA 420 SVDSQSWGNG HHHPIELQMQ IHHPNIEGGN NLFQDFQVFK TPCEIGMFSN QIS

Sequence ? help Back to Top

Protein Sequence Length: 473 aa Download sequence

MEWNARPPLQ WDWDNLTVLN PRYSEHGDVL HPTIFQTKHG INFGPSNSAG DDRTTGGPFF  60
KLGQTSPKIS KSVSTNSSSF EKSRTTKFTL EGFEPTLEDS CNKKEFVEAE VVSTYGTPET  120
STCSCEPMLS LKLGKQAYFE NASAVNLTKP SALMVESRAT RKRGQNTPSA HCQVEGCNID  180
ISNVKDYYRK HRVCESHSKS PKVIIGGFER RFCQQCSRFH SISEFDGKKR SCRRRLSNHN  240
ARRRKPQSKV VSLNPARLSS WDFENRQIDI FSDKLSLIYP TPNEKSAWES AFSSRHPQCG  300
KYISKPEPTY GSIGQLNVSG DEMCYVHAMP YHDNTSKAVP FKGAATKILD PEGYVIPSDL  360
NSAQDLQRAL SLLSTDTKGP YEARLFAPDN PNRLVNPNYA NQPSISQSPL NLEIQTLPFA  420
SVDSQSWGNG HHHPIELQMQ IHHPNIEGGN NLFQDFQVFK TPCEIGMFSN QIS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	228	245	KKRSCRRRLSNHNARRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G43270.1	5e-46	SBP family protein