PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957167.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 373aa MW: 42552.6 Da PI: 8.7085

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957167.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.2	0.00013	94	114	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C Cgk F +++ L+ H+ +H XP_022957167.1 94 CRECGKGFQSSEALTWHLASH 114 ******************999 PP
2	zf-C2H2	12.9	0.00034	309	331	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kCp+C k F++ L H r+H XP_022957167.1 309 HKCPICFKAFKSGQALGGHKRSH 331 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 373 aa Download sequence
MENSKENKFV CNFCHKSFTC GKSLGGHIRI HKNEKQTERT NILKFQVPTE RRRSKRDSES 60 EFANDNSGYG LRENPKITQR FADSRYPLMQ EKFCRECGKG FQSSEALTWH LASHSQNNIY 120 GIPHQKREFI DNRSDIPDKV REAAMCLMMM SDSKSFASHS NGRLEKLDVY ECGGENSDTE 180 NFRQEVYKRV KLKVCLNRGV MDEEYKNPDG KYGVRIGKTK ENDEQVHASS YKYELRKRLN 240 NESYSPNFRE MYTKMSNGCE WTHQSGENSV TNSMSIPARE LTELSNGKNK AHQDSSGNEE 300 KKLGAKKKHK CPICFKAFKS GQALGGHKRS HVVGSLEEAS IVTRPESNGM SGLIDLNVPA 360 PMEEEESGRW GEG

Sequence ? help Back to Top

Protein Sequence Length: 373 aa Download sequence

MENSKENKFV CNFCHKSFTC GKSLGGHIRI HKNEKQTERT NILKFQVPTE RRRSKRDSES  60
EFANDNSGYG LRENPKITQR FADSRYPLMQ EKFCRECGKG FQSSEALTWH LASHSQNNIY  120
GIPHQKREFI DNRSDIPDKV REAAMCLMMM SDSKSFASHS NGRLEKLDVY ECGGENSDTE  180
NFRQEVYKRV KLKVCLNRGV MDEEYKNPDG KYGVRIGKTK ENDEQVHASS YKYELRKRLN  240
NESYSPNFRE MYTKMSNGCE WTHQSGENSV TNSMSIPARE LTELSNGKNK AHQDSSGNEE  300
KKLGAKKKHK CPICFKAFKS GQALGGHKRS HVVGSLEEAS IVTRPESNGM SGLIDLNVPA  360
PMEEEESGRW GEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	5e-23	C2H2 family protein