PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956595.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 214aa    MW: 23931.9 Da    PI: 7.533
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956595.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.78.6e-057799123
                    EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                    ++C++C k F+++  L  H++ H
  XP_022956595.1 77 FECQYCFKEFTNSQALGGHQNAH 99
                    89******************988 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MMGKASLECN FEDRESGLCS EGSCMEKKLK LFGFELNPSE ELATNWRLKG SVGEANESVS  60
SSTTVSEQAM AINKPKFECQ YCFKEFTNSQ ALGGHQNAHK KERLKKKKMQ LQARKATLSY  120
YYLHPFQTAS NNFLYHFPSS HTHHDDSSQI SFNQNDAEFI HFESFLPPER RLFTLTPADS  180
SSAAAKPVVF QSSSSLPPVA SPSCKSLDLQ LGLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1102108ERLKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G10480.12e-16C2H2 family protein