PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022955593.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | CAMTA | ||||||||
Protein Properties | Length: 952aa MW: 106356 Da PI: 7.0836 | ||||||||
Description | CAMTA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CG-1 | 176 | 4.8e-55 | 20 | 135 | 3 | 117 |
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k++l+ +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n +fqr XP_022955593.1 20 QEaQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQR 114 5559******************************************************************************************* PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+e+le+ivlvhy+ev XP_022955593.1 115 RSYWMLDEQLEHIVLVHYREV 135 *******************98 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 952 aa Download sequence |
MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF 60 DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML 120 DEQLEHIVLV HYREVNEGYR SGISRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP 180 LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGSSDLCG QEIVIIQSAI 240 TDSITHKLID ARLASSGLVK NMVNSGHGLI ADEEVPAAKA VSQRIVQVVD DSFVQVEKTS 300 KYDLNHEGFG ELKKLDSFGR WMDKEIGRDC DDSLMTLDSG NYWCALDAGN DEKEVSSLSH 360 HMQLDIDSLG PSLSQDQLFS ISDFSPDWAY SGNVTKVLIV GSFLGSKKLP VETQWGCMFG 420 EVEVSAEVLS NSVLRCQTPL HAPGRIPFYV TCCNRLACSE VREFEFREKL PTLSVPNAIK 480 CASEDELRFQ MRLTRLLNLC LEEKWLDCSI KNCEKCKIIG LMKSSRSDIA KWRMMEGISI 540 PLISDGMNPR DFMIQTLLVD KLCEWLACKV HEGTMGTHVL DEEGLGVIHL AAALGYAWTI 600 GPIIASGVSP NFRDSKGRTA LHWASYFGRE ETVATLVRLG VSPGAVDDPT SGFPGGQTAA 660 DLASSRGHKG IAGYLAEADL IAHLRSLTDG ENLKDNVKEN VNVDETIQTA DVVSSQLAED 720 ELLSLKGSLA AVRKSVHAAA LIHAAFRARS FRHKQLMGSD KEMIHEESVD LVALGILNKA 780 EKIHYEDYLH VAAVRIQQNY RGWKGRKEFL KIRNRIVKIQ AHVRGYQVRK LYRKVIWTVS 840 IVEKAILRWR RKRVGLRGFK AEGATGEVAS SHSQVEKSDD YEFLRIGRQL KYADVEKALS 900 RVKSMARSPE ARHQYMRLVT KFHIFKINDE EPSGSNEDGS SQEIQKEEQN LA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G09410.1 | 0.0 | CAMTA family protein |