PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022953634.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

DBB

Protein Properties

Length: 236aa MW: 26054.8 Da PI: 4.6469

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022953634.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	22.4	2.5e-07	4	44	5	39
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htv 39 C+ +e+ +++ C ++ lC++C +e H H++ XP_022953634.1 4 QCDVCEKAPATVICCADEAALCAKCDVEVHAAnklaskHQR 44 7*****************************65667777765 PP
2	zf-B_box	28.5	3.2e-09	53	94	2	37
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 + +kC+ +++k + +fC +++ l+C+dC + +H+ H XP_022953634.1 53 KLPKCDICQDKAAFIFCVEDRALFCQDCDEPIHSTgslsanH 94 5799*****************************656666666 PP

Sequence ? help Back to Top
Protein Sequence Length: 236 aa Download sequence
MKIQCDVCEK APATVICCAD EAALCAKCDV EVHAANKLAS KHQRLLLQCL STKLPKCDIC 60 QDKAAFIFCV EDRALFCQDC DEPIHSTGSL SANHQRFLAT GIRVAMSSSC MKDVDKVKME 120 PPNPKNPQVP AKIPPQQVPN FTSPWAVDDF LHFSDLESSD KKEQLEFGEL EWLAEMGLFG 180 EQVPEEALAA AEVPELPTSH AGSAFTCRQT KSSTSYKKPR IEMVDDEEFF TVPDLG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G06040.1	3e-97	DBB family protein