PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022953328.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

C2H2

Protein Properties

Length: 510aa MW: 55804.6 Da PI: 9.8389

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022953328.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	17.2	1.4e-05	89	111	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_022953328.1 89 FVCEICNKGFQRDQNLQLHRRGH 111 89*******************88 PP

Sequence ? help Back to Top
Protein Sequence Length: 510 aa Download sequence
MFCSCLCLIQ LNSKPQTPNK QTKKKRASNM FSPTIMSNST SLSDQATIFS NIHHSPQKLK 60 KKRSLPGNPD PDAEVIALSP TTLLATNRFV CEICNKGFQR DQNLQLHRRG HKLPWKLKQR 120 SSKEMKKKAY VCPEEGCVHH NPSRALGDLT GIKKHYSRKH GEKKWKCLKC SKLYAVQSDW 180 KAHSKTCGTR EYRCDCGTLF SRKDRFLTHR AFCDALAEES ARLSANQLAI ASAASGATGV 240 DVSLSSTTVA QSLFPFGNHY QFSNSLIPSS PSSLSLSSSQ TLVSLNPWNH PLNPNPNHTL 300 QMIKPEDSNS HHFQQIPNLP LSDDSSNNNN YHPFGLIQDH HHKARSSSSS SSSMITSPFR 360 NLHVSVQPAS NVATSAHLSA TALLQKAATV GIDAAKSGHH QPESVGHITH FNIPEFRPSN 420 HISSLSQLGP DYATWQKSDR LTRDFLGLTG HGNGTGSGSG SGGSVHVSMI VKDMLTYAGG 480 IEMFKPHNNN NNSNGFGYGE AAANGTWGDC

Sequence ? help Back to Top

Protein Sequence Length: 510 aa Download sequence

MFCSCLCLIQ LNSKPQTPNK QTKKKRASNM FSPTIMSNST SLSDQATIFS NIHHSPQKLK  60
KKRSLPGNPD PDAEVIALSP TTLLATNRFV CEICNKGFQR DQNLQLHRRG HKLPWKLKQR  120
SSKEMKKKAY VCPEEGCVHH NPSRALGDLT GIKKHYSRKH GEKKWKCLKC SKLYAVQSDW  180
KAHSKTCGTR EYRCDCGTLF SRKDRFLTHR AFCDALAEES ARLSANQLAI ASAASGATGV  240
DVSLSSTTVA QSLFPFGNHY QFSNSLIPSS PSSLSLSSSQ TLVSLNPWNH PLNPNPNHTL  300
QMIKPEDSNS HHFQQIPNLP LSDDSSNNNN YHPFGLIQDH HHKARSSSSS SSSMITSPFR  360
NLHVSVQPAS NVATSAHLSA TALLQKAATV GIDAAKSGHH QPESVGHITH FNIPEFRPSN  420
HISSLSQLGP DYATWQKSDR LTRDFLGLTG HGNGTGSGSG SGGSVHVSMI VKDMLTYAGG  480
IEMFKPHNNN NNSNGFGYGE AAANGTWGDC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G66730.1	1e-106	C2H2 family protein