PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953151.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 761aa    MW: 87824.9 Da    PI: 8.2929
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953151.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.65.5e-2043117189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +fY++YA++vGF+vr+ + ++s+++g++ +r+fvCskeg++ +              +rtgC a ++v+++++g w+++ ++++HnH++
  XP_022953151.1  43 NFYSSYAQRVGFKVRIGQLYRSRTDGTVSSRRFVCSKEGFQLS--------------SRTGCPAVIRVQRRDSGMWVIDLFHKDHNHHF 117
                     6***************************************876..............589***************************97 PP
2FAR169.48.5e-22198274191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fYn+YA ++GF++r+ +  +sk++g+it+r+fvCskeg+++++              r gC a +++k++++gkw+v++l++eHnH+l p
  XP_022953151.1 198 QFYNAYAANAGFRIRIGQLFRSKNSGSITSRRFVCSKEGFQHPS--------------RLGCGAFMRIKRHESGKWVVDRLKKEHNHDLEP 274
                     6***************************************9994..............789***************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 761 aa     Download sequence    
MIVKAYPIDM VRATDELGGE NDGNCMLEPF VGQEFDSSDA ALNFYSSYAQ RVGFKVRIGQ  60
LYRSRTDGTV SSRRFVCSKE GFQLSSRTGC PAVIRVQRRD SGMWVIDLFH KDHNHHFEHD  120
DGGETLPTFQ VKAPRSAKLM VNVSHRRKIH LFKDVEHAFS CSSGIIDSKH LNERGNVIPP  180
RGEPCVGLEF NSANEAYQFY NAYAANAGFR IRIGQLFRSK NSGSITSRRF VCSKEGFQHP  240
SRLGCGAFMR IKRHESGKWV VDRLKKEHNH DLEPQPETQK RNLTVSKRFT GELNGGFEGK  300
EPVNLNYGIV IKRTRENKIG SDWYPGLFEY FQSKQAEDTG FFYAVEVENS NCMSVFWADG  360
RSRFSCSQFG DTIILDTSYR KSAYAVPFAT FFGVNHHKQP VLLACALIAE ESVESFSWLF  420
QTWLRAMSGC HPLSIIADQD KAIQQAVAQV FPRTLHCFSS WQIRKKEQDN LNMLDETFRF  480
EYEKCIYQSQ TAEEFDVGWN MLVGKYGLKD NAWFKEMYIK RNNWVPLFLR GTFFAGIPTT  540
DNFESCFGAA FNAQTPLAEF ISRYEIGLER RRDEERKESL NSLNLQGFLQ TKEPVEEQCL  600
RLYTHAVFKV FQKELLHCYR YLGFKIYEEV ALSRYLVRRC ENDNEKCVVT VISTNLTVNC  660
SCKMFEYEGI LCRHILRVFQ ILGISEIPPR YILHRWTRNA EYGTLLDVDT DGGPQELKAV  720
MLWSLREAAC KYIEAGATSL EKYKLAYEIM REGGRKLRWQ R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.10.0FAR1 family protein