PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022953141.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 231aa MW: 24855.8 Da PI: 8.8163 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 63.3 | 5e-20 | 25 | 74 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr ++ +gr++AeIrdp gk+ r++lg+f+taeeAa+a++ a+++++g XP_022953141.1 25 HFRGVRKRP-WGRYAAEIRDP---GKKSRVWLGTFDTAEEAARAYDSAARQFRG 74 69*******.**********8...557************************998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 231 aa Download sequence |
MVAKEKSAAK SLPSLCNNTY AKELHFRGVR KRPWGRYAAE IRDPGKKSRV WLGTFDTAEE 60 AARAYDSAAR QFRGAKAKTN FPLEEELIDV SPQKINQSPS PSSTVESSSS SSQEKTPSPE 120 IARNYGATVG VGRTSPFLQP QFLHQVGCNV SAAAAAGSGG GVRPILFMDA FVRPEFVAHG 180 YPIRFDPATV DLTARFSGGS HSDSDSSSVV DCRPVKEILN LDLNLAPPVD A |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G44210.1 | 2e-28 | ERF family protein |