PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953139.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family FAR1
Protein Properties Length: 788aa    MW: 90748 Da    PI: 7.969
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953139.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR163.65.8e-2070144189
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHel 89 
                     +fY++YA++vGF+vr+ + ++s+++g++ +r+fvCskeg++ +              +rtgC a ++v+++++g w+++ ++++HnH++
  XP_022953139.1  70 NFYSSYAQRVGFKVRIGQLYRSRTDGTVSSRRFVCSKEGFQLS--------------SRTGCPAVIRVQRRDSGMWVIDLFHKDHNHHF 144
                     6***************************************876..............589***************************97 PP
2FAR169.39.1e-22225301191
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +fYn+YA ++GF++r+ +  +sk++g+it+r+fvCskeg+++++              r gC a +++k++++gkw+v++l++eHnH+l p
  XP_022953139.1 225 QFYNAYAANAGFRIRIGQLFRSKNSGSITSRRFVCSKEGFQHPS--------------RLGCGAFMRIKRHESGKWVVDRLKKEHNHDLEP 301
                     6***************************************9994..............789***************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 788 aa     Download sequence    
MDKLLGTNLT NVTSSDTDLN NEQCENAMIV KAYPIDMVRA TDELGGENDG NCMLEPFVGQ  60
EFDSSDAALN FYSSYAQRVG FKVRIGQLYR SRTDGTVSSR RFVCSKEGFQ LSSRTGCPAV  120
IRVQRRDSGM WVIDLFHKDH NHHFEHDDGG ETLPTFQVKA PRSAKLMVNV SHRRKIHLFK  180
DVEHAFSCSS GIIDSKHLNE RGNVIPPRGE PCVGLEFNSA NEAYQFYNAY AANAGFRIRI  240
GQLFRSKNSG SITSRRFVCS KEGFQHPSRL GCGAFMRIKR HESGKWVVDR LKKEHNHDLE  300
PQPETQKRNL TVSKRFTGEL NGGFEGKEPV NLNYGIVIKR TRENKIGSDW YPGLFEYFQS  360
KQAEDTGFFY AVEVENSNCM SVFWADGRSR FSCSQFGDTI ILDTSYRKSA YAVPFATFFG  420
VNHHKQPVLL ACALIAEESV ESFSWLFQTW LRAMSGCHPL SIIADQDKAI QQAVAQVFPR  480
TLHCFSSWQI RKKEQDNLNM LDETFRFEYE KCIYQSQTAE EFDVGWNMLV GKYGLKDNAW  540
FKEMYIKRNN WVPLFLRGTF FAGIPTTDNF ESCFGAAFNA QTPLAEFISR YEIGLERRRD  600
EERKESLNSL NLQGFLQTKE PVEEQCLRLY THAVFKVFQK ELLHCYRYLG FKIYEEVALS  660
RYLVRRCEND NEKCVVTVIS TNLTVNCSCK MFEYEGILCR HILRVFQILG ISEIPPRYIL  720
HRWTRNAEYG TLLDVDTDGG PQELKAVMLW SLREAACKYI EAGATSLEKY KLAYEIMREG  780
GRKLRWQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.10.0FAR1 family protein