PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952885.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 675aa MW: 78275.3 Da PI: 7.1909

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952885.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.5	5.4e-24	76	167	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+v+++++ HnHel XP_022952885.1 76 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGYNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVSQWYVSQFSNVHNHELL 167 69******************8888.**************************************998767789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 675 aa Download sequence
MFSPEMAMKL PANIWIRRQQ CPCGDWKCYI RYEGEDQASI SGRLVKSETV PSQLSSESVF 60 APYVGQIFKS DEDAFEYYSN FARKNGFSIR KARSTESQNL GVYRRDFVCY RSGYNQPRKK 120 ANVEHPRERK SVRCGCDAKL YLTKEIVDGV SQWYVSQFSN VHNHELLEDD QVRLLPAYRK 180 IQEADQERIL LLSKAGFPVN RILKVLELEK GVQPGQLPFI EKDVRNFVRT CKKTVEENDA 240 LLNEKRENEL LELLEICKAM AKRDTEFVFD YTRDENVSFD TSYRSLTYGL LLGVWFGMSN 300 HGKAIIFGCV LLQEENSHSF SWALQKFVQF MRGKHPRTIL TDIDSGLRDA ISRELPNTKH 360 VVCIWHILSK LSSWFLLPLG LHYADFKVQF DMLWHLENIS DFEHQWDLLV AQFGLASDKH 420 IALLYLYRAS WPFSFIRSSF LARTLTADFF QSLETFLKRI LGAQTCLQVF FEQVSNAAYS 480 GSRAKEGMQY LHIKTGMPIE EHAQSTLTPY AFNVLQNEIV LSMQYVATEM GNGSYLLQHY 540 KKMDVERLVS WTQDDEQVHC ACKEFDHSGI LCRHSIRVLA VKNYFKLPDK YFLLRWRLQN 600 SLGTIDDAHS QGRSEACAQV FHSLAATLLT ESLISQERFN YVHRELSGLL EHVRTMPVVD 660 EFSLNRTTVN EFNDP

Sequence ? help Back to Top

Protein Sequence Length: 675 aa Download sequence

MFSPEMAMKL PANIWIRRQQ CPCGDWKCYI RYEGEDQASI SGRLVKSETV PSQLSSESVF  60
APYVGQIFKS DEDAFEYYSN FARKNGFSIR KARSTESQNL GVYRRDFVCY RSGYNQPRKK  120
ANVEHPRERK SVRCGCDAKL YLTKEIVDGV SQWYVSQFSN VHNHELLEDD QVRLLPAYRK  180
IQEADQERIL LLSKAGFPVN RILKVLELEK GVQPGQLPFI EKDVRNFVRT CKKTVEENDA  240
LLNEKRENEL LELLEICKAM AKRDTEFVFD YTRDENVSFD TSYRSLTYGL LLGVWFGMSN  300
HGKAIIFGCV LLQEENSHSF SWALQKFVQF MRGKHPRTIL TDIDSGLRDA ISRELPNTKH  360
VVCIWHILSK LSSWFLLPLG LHYADFKVQF DMLWHLENIS DFEHQWDLLV AQFGLASDKH  420
IALLYLYRAS WPFSFIRSSF LARTLTADFF QSLETFLKRI LGAQTCLQVF FEQVSNAAYS  480
GSRAKEGMQY LHIKTGMPIE EHAQSTLTPY AFNVLQNEIV LSMQYVATEM GNGSYLLQHY  540
KKMDVERLVS WTQDDEQVHC ACKEFDHSGI LCRHSIRVLA VKNYFKLPDK YFLLRWRLQN  600
SLGTIDDAHS QGRSEACAQV FHSLAATLLT ESLISQERFN YVHRELSGLL EHVRTMPVVD  660
EFSLNRTTVN EFNDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein