PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022952884.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

FAR1

Protein Properties

Length: 693aa MW: 80156.4 Da PI: 7.1048

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022952884.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	76.4	5.6e-24	71	162	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 ++Y+++A++ GFs+rk++s++s++ g +++r+fvC+++g+++++kk+++++ r+r++ r+gC+akl ++ke ++w+v+++++ HnHel XP_022952884.1 71 EYYSNFARKNGFSIRKARSTESQNLG-VYRRDFVCYRSGYNQPRKKANVEHPRERKSVRCGCDAKLYLTKEIvdgVSQWYVSQFSNVHNHELL 162 69******************8888.**************************************998767789***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 693 aa Download sequence
MAMKLPANIW IRRQQCPCGD WKCYIRYEGE DQASISGRLV KSETVPSQLS SESVFAPYVG 60 QIFKSDEDAF EYYSNFARKN GFSIRKARST ESQNLGVYRR DFVCYRSGYN QPRKKANVEH 120 PRERKSVRCG CDAKLYLTKE IVDGVSQWYV SQFSNVHNHE LLEDDQVRLL PAYRKIQEAD 180 QERILLLSKA GFPVNRILKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV EENDALLNEK 240 RENELLELLE ICKAMAKRDT EFVFDYTRDE NGKVENLSWA YGDPIHAYSV LGDVVSFDTS 300 YRSLTYGLLL GVWFGMSNHG KAIIFGCVLL QEENSHSFSW ALQKFVQFMR GKHPRTILTD 360 IDSGLRDAIS RELPNTKHVV CIWHILSKLS SWFLLPLGLH YADFKVQFDM LWHLENISDF 420 EHQWDLLVAQ FGLASDKHIA LLYLYRASWP FSFIRSSFLA RTLTADFFQS LETFLKRILG 480 AQTCLQVFFE QVSNAAYSGS RAKEGMQYLH IKTGMPIEEH AQSTLTPYAF NVLQNEIVLS 540 MQYVATEMGN GSYLLQHYKK MDVERLVSWT QDDEQVHCAC KEFDHSGILC RHSIRVLAVK 600 NYFKLPDKYF LLRWRLQNSL GTIDDAHSQG RSEACAQVFH SLAATLLTES LISQERFNYV 660 HRELSGLLEH VRTMPVVDEF SLNRTTVNEF NDP

Sequence ? help Back to Top

Protein Sequence Length: 693 aa Download sequence

MAMKLPANIW IRRQQCPCGD WKCYIRYEGE DQASISGRLV KSETVPSQLS SESVFAPYVG  60
QIFKSDEDAF EYYSNFARKN GFSIRKARST ESQNLGVYRR DFVCYRSGYN QPRKKANVEH  120
PRERKSVRCG CDAKLYLTKE IVDGVSQWYV SQFSNVHNHE LLEDDQVRLL PAYRKIQEAD  180
QERILLLSKA GFPVNRILKV LELEKGVQPG QLPFIEKDVR NFVRTCKKTV EENDALLNEK  240
RENELLELLE ICKAMAKRDT EFVFDYTRDE NGKVENLSWA YGDPIHAYSV LGDVVSFDTS  300
YRSLTYGLLL GVWFGMSNHG KAIIFGCVLL QEENSHSFSW ALQKFVQFMR GKHPRTILTD  360
IDSGLRDAIS RELPNTKHVV CIWHILSKLS SWFLLPLGLH YADFKVQFDM LWHLENISDF  420
EHQWDLLVAQ FGLASDKHIA LLYLYRASWP FSFIRSSFLA RTLTADFFQS LETFLKRILG  480
AQTCLQVFFE QVSNAAYSGS RAKEGMQYLH IKTGMPIEEH AQSTLTPYAF NVLQNEIVLS  540
MQYVATEMGN GSYLLQHYKK MDVERLVSWT QDDEQVHCAC KEFDHSGILC RHSIRVLAVK  600
NYFKLPDKYF LLRWRLQNSL GTIDDAHSQG RSEACAQVFH SLAATLLTES LISQERFNYV  660
HRELSGLLEH VRTMPVVDEF SLNRTTVNEF NDP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28530.1	0.0	FAR1 family protein