PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022952794.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 284aa MW: 33362.3 Da PI: 9.2889 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 55.3 | 1.5e-17 | 24 | 69 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg W + Ede+l ++v ++G +W++Ia++++ gR++k+c++rw++ XP_022952794.1 24 RGHWRPAEDEKLRQLVDKYGAQNWNSIAQKLQ-GRSGKSCRLRWFNQ 69 899*****************************.***********996 PP | |||||||
2 | Myb_DNA-binding | 60.7 | 3.1e-19 | 76 | 119 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 r+++++eE+e+l+ a++ +G++ W++Iar ++ gRt++ +k++w+ XP_022952794.1 76 RKPFSEEEEERLLAAHQIHGNK-WSLIARLFP-GRTDNAVKNHWHV 119 789*******************.*********.***********96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 284 aa Download sequence |
MVMMMKDSGL DHHVDYEYKS SCSRGHWRPA EDEKLRQLVD KYGAQNWNSI AQKLQGRSGK 60 SCRLRWFNQL DPRIIRKPFS EEEEERLLAA HQIHGNKWSL IARLFPGRTD NAVKNHWHVI 120 MARKQRERSK LCGSKRTFQE FSAFNFPGNQ TESLGTYNIN DNNNSFLELQ NSHKDGTVWN 180 FRHYLKGSND NNISILHDTY HKFRTPSSAR VCYPNHKIPF GVYEFGSNSE VIKRELAFVN 240 FIANTDRHRH YHHRLLHDQE RQEDESLTDK DVPFIDFLGV GVSS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G17950.1 | 6e-69 | MYB family protein |