PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952769.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 222aa    MW: 24622.6 Da    PI: 9.2633
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952769.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP264.13e-20104154256
             AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                      y+GVr ++ +g+W+AeIrdp+    r +r++lg+f tae+Aa+a+++a+ k++g+
  XP_022952769.1 104 NYRGVRLRP-WGKWAAEIRDPK----RaTRVWLGTFNTAEDAARAYDEAAIKFRGA 154
                     59*******.**********83....57*************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    
MSSYRPAVFR SITEEQEVSI IVDALTHVIS GAAASGLEFR HDDFLRRLLL PPSTDNTAAA  60
FSGSSDFDTC QDCRINGCLG CHFFSTPSSS SSSSTRRIRR LKKNYRGVRL RPWGKWAAEI  120
RDPKRATRVW LGTFNTAEDA ARAYDEAAIK FRGARAKLNF PLPGNSSTTS TTTSAVNEPA  180
VAPRASPMKM ETKHYTLPEI FKVDDDDDIQ RLINDFAGHS RS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.12e-31ERF family protein