PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022952752.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | BBR-BPC | ||||||||
Protein Properties | Length: 314aa MW: 35107.9 Da PI: 10.2203 | ||||||||
Description | BBR-BPC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GAGA_bind | 363.3 | 4.8e-111 | 1 | 314 | 1 | 301 |
GAGA_bind 1 mdddgsre..rnkg.yye..............pa.aslkenlglqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalver 77 mdd ++e r+k y++ ++ ++l +++++ms+iaerda+irernlalsekk+a+a+rd+a+ qrd+a+a+r+ al+er XP_022952752.1 1 MDDGRHHEngRHKLdYFRgspspwhmapphhvKEpNALV--MNKKIMSIIAERDAAIRERNLALSEKKGALAARDEALRQRDEAIAQRDSALMER 93 777766666888887888999999999876663335666..99**************************************************** PP GAGA_bind 78 dnkllalllvenslasalpvgvqvlsgtksidslqqlsepqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkk..kkk 170 dn+l+al+ ++n+ s+ p g ++ ++tk +++l + + p + +s++++++ ++++a+pi+ a+ea ++++ +++ + +k+ ++k++k kk XP_022952752.1 94 DNALAALEIRDNA--SNFPLGNGIQRKTKRLHHLSN-HMPSMCESPYGTKDVHITDAFPITVIASEAVKSRQGNRTTKDNKAVSSKTSKLprKKV 185 *********9998..77899999*********9998.77************************99999999999888777777777776511344 PP GAGA_bind 171 sekskkkvkkesaderskaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgaf 265 +e+ +++ ++++ ++ +++++ +d++ln vs+D+s++P+PvCsCtG rqCYkWGnGGWqS+CCtt +S+yPLP ++++r+ R++grKmS+++f XP_022952752.1 186 GEDLNRQAATDG--TKYRTDWDGQDVGLNLVSFDDSSMPAPVCSCTGLARQCYKWGNGGWQSSCCTTHMSMYPLPHMPNKRHVRMGGRKMSGSVF 278 455555555554..78******************************************************************************* PP GAGA_bind 266 kklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301 +klL++Laa G+dls pvDLkdhWA+HGtn+++tir XP_022952752.1 279 TKLLSRLAAAGHDLSVPVDLKDHWARHGTNRYITIR 314 ***********************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 314 aa Download sequence |
MDDGRHHENG RHKLDYFRGS PSPWHMAPPH HVKEPNALVM NKKIMSIIAE RDAAIRERNL 60 ALSEKKGALA ARDEALRQRD EAIAQRDSAL MERDNALAAL EIRDNASNFP LGNGIQRKTK 120 RLHHLSNHMP SMCESPYGTK DVHITDAFPI TVIASEAVKS RQGNRTTKDN KAVSSKTSKL 180 PRKKVGEDLN RQAATDGTKY RTDWDGQDVG LNLVSFDDSS MPAPVCSCTG LARQCYKWGN 240 GGWQSSCCTT HMSMYPLPHM PNKRHVRMGG RKMSGSVFTK LLSRLAAAGH DLSVPVDLKD 300 HWARHGTNRY ITIR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G21240.1 | 1e-133 | BBR-BPC family protein |