PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952658.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 229aa    MW: 25049.2 Da    PI: 7.3585
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952658.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH11.30.000631291661254
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                     R +++ +++  L++l+ +      +K + a++L +A+ YIk L
  XP_022952658.1 129 RKEKLGERITALQQLVSPF-----GKTDTASVLHEAMGYIKFL 166
                     6678889999999999998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 229 aa     Download sequence    
MAENQSSGRD PKTAAATTFS QLLFSANHDE DDDIDVDKHH HVHHQIFEYS VSSSFAIENP  60
PKMLCFGTKQ EQEHPQLGLR SAHACSDSVK RKNGSNPETT AIKPAPLSNQ KASKKTKPEA  120
PCSAGHAKRK EKLGERITAL QQLVSPFGKT DTASVLHEAM GYIKFLHEQI QVLYSPYLDK  180
NQLGGGNGDT EGELKGRGLC LIPVECSLHL ANCTVADFWS PAMAMGRKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19500.11e-40bHLH family protein