PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022952052.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YB | ||||||||
Protein Properties | Length: 217aa MW: 24206.2 Da PI: 6.6687 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 161.2 | 1.5e-50 | 61 | 157 | 1 | 97 |
NF-YB 1 vreqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyreleg 95 vreqd+++Pian++rim+++lP++akis+dake++qecvse+isf+tsea+++cqre+rkt++++d+lwa+++lGf++y++pl v+l+ yrele+ XP_022952052.1 61 VREQDQYMPIANMIRIMRRILPSHAKISDDAKEIIQECVSEYISFITSEANEQCQREQRKTVTAEDVLWAMGKLGFDNYIKPLIVFLNCYRELES 155 69********************************************************************************************9 PP NF-YB 96 ek 97 ++ XP_022952052.1 156 DR 157 86 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MNLKHLVSAL NVLLTTNKSS PANSNHQQSN SRNVAAKSPV TGSTPASIAA TNNEQSQQCI 60 VREQDQYMPI ANMIRIMRRI LPSHAKISDD AKEIIQECVS EYISFITSEA NEQCQREQRK 120 TVTAEDVLWA MGKLGFDNYI KPLIVFLNCY RELESDRIRT EPIMRRNVDY GPHVGMISPY 180 GQTFQIGHVP TEMFDAMGRY YDGGGNGGSS SGNDSQL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G21970.1 | 9e-64 | NF-YB family protein |