PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022952038.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 294aa    MW: 31750.1 Da    PI: 7.2551
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022952038.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.95.6e-11176223455
                     HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++YI+sLq
  XP_022952038.1 176 SHSLAERARREKISDRMKILQDLVPGC----NKVIGKALVLDEIINYIQSLQ 223
                     8*************************9....677*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 294 aa     Download sequence    
MDPPTLMNQG SFPNDANANA NATAYNLSEM WQFPINGGTG VEESGGGLGL RMAQFAHNLG  60
QFGEISMENP EVSRGDPVSQ RVVGHGHGGS KKRRDAELDS AKASSTSNGN NGNSGGANVS  120
AGKRLKTAAC RDDNHASKTE AEPRSGKAEC NSQPPPEQPK QDYIHVRARR GQATDSHSLA  180
ERARREKISD RMKILQDLVP GCNKVIGKAL VLDEIINYIQ SLQHQVEFLS MKLEAVNSRV  240
SPGIEVFPPK DYGQQTFDTT GVAFGSQATR EYSSRGPSPE WLHMQIGGGF ERTT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.14e-86bHLH family protein