PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951834.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NAC

Protein Properties

Length: 361aa MW: 40441 Da PI: 7.4611

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951834.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	30.8	8.4e-10	22	113	16	127
NAM 16 veyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvglkktLvfyk 110 ++ L++ +g++ ++ +v++ +d y+++P++Lp + ++f+ k d ++ ++ W+ +g d +++s ++ +g + t +y+ XP_022951834.1 22 CRVLRRISNGDPRPE-NVLAGIDPYQFKPENLP-------DGVWFYGKCDGNS-----------NSSWRRKGGDIKLYS-DSFFTGWRATYEYYE 96 466777777777666.88999999999999999.......3567887776643...........356**********.9999******* PP NAM 111 grapkgektdWvmheyr 127 g+ap+ +kt Wv+hey XP_022951834.1 97 GQAPHEHKTAWVLHEYW 113 **************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MTPSTGTSPA TLDLFVTEKE VCRVLRRISN GDPRPENVLA GIDPYQFKPE NLPDGVWFYG 60 KCDGNSNSSW RRKGGDIKLY SDSFFTGWRA TYEYYEGQAP HEHKTAWVLH EYWTTDSGTS 120 RNSKQRETSS LYKLFVGDEQ FQSPEKIQKI ELSTVPNSES IDQNHQLVVP NGSNNMENGS 180 TNQPEMREVI RSDMDYISRG DFLGIQDLDT PAFSSSSSEN SSRLSFASDE YFDPMALLRD 240 IDRDNNFDTV QRDAACIRSS APIRLRTEVV HQGGSESLVD TNGSHLPGKE SPKPESVVPG 300 SGCKEPKLLK GEASSNCQNK VVAKGKEAAA AMDGGKKKKK KKSISRMKKI QKKYFCFFFS 360 F

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MTPSTGTSPA TLDLFVTEKE VCRVLRRISN GDPRPENVLA GIDPYQFKPE NLPDGVWFYG  60
KCDGNSNSSW RRKGGDIKLY SDSFFTGWRA TYEYYEGQAP HEHKTAWVLH EYWTTDSGTS  120
RNSKQRETSS LYKLFVGDEQ FQSPEKIQKI ELSTVPNSES IDQNHQLVVP NGSNNMENGS  180
TNQPEMREVI RSDMDYISRG DFLGIQDLDT PAFSSSSSEN SSRLSFASDE YFDPMALLRD  240
IDRDNNFDTV QRDAACIRSS APIRLRTEVV HQGGSESLVD TNGSHLPGKE SPKPESVVPG  300
SGCKEPKLLK GEASSNCQNK VVAKGKEAAA AMDGGKKKKK KKSISRMKKI QKKYFCFFFS  360
F

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	336	342	KKKKKKK
2	337	349	KKKKKKSISRMKK
3	338	350	KKKKKKSISRMKK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34190.1	1e-12	NAC family protein