PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951801.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 626aa MW: 66675.6 Da PI: 8.1674

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951801.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	24.2	8e-08	201	245	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHH..HHTTTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIar..tmgkgRtlkqcksrw 44 r++W++ Ed+ l avk+ G g+W+ I r + Rt+ q+ rw XP_022951801.1 201 RKPWSEAEDLELMAAVKKCGEGNWANILRgdFLS-DRTASQLSQRW 245 789************************9822354.77777777777 PP

Sequence ? help Back to Top
Protein Sequence Length: 626 aa Download sequence
MKLKKRSVSE KDISTFLPRY SPTTVLTLLQ EVSQVSEAKP KIDWNEIVKN TSTGISNPRE 60 YQMLWRHLAY RHALLDNLED ETAPLEDDSD LECELEPFPS FSCETSTEAA ACAKVFIASG 120 SSSHLSLPSS STIEAPLTIN LPRSYMAGVQ FEDADPACSI RGASITVPIS VQRQPVLTSP 180 SAEGLTTNGS TYGNNASRRK RKPWSEAEDL ELMAAVKKCG EGNWANILRG DFLSDRTASQ 240 LSQRWAIIKK RHGNLNVGAN TAGTQLSEVQ LAARHAMSLA LDRPVGSLKA ARISGSASTN 300 TIGNGSSLAP VASSEQVQDK LHQRPTHTKP HPVGSSSLTA KAQVTASKKM IPKSSFDSDC 360 IVKAAAVAAG ARIASPADAA CLLKAAQSKN AIHIMAKVPA STKTPTPARG PNHLEAHPSI 420 KTTTLPNTSA VMPSVTHGGG PVKITSSTTA TLSSVPTDQN ISVASVTAAA NPLSEKETKT 480 TEETRGLGLG GVQATAQKDC RSRQSISERV QEEKPADLGP PLKRQATETS NCSSSQNTST 540 ADVDIKVETG NQVEERQNAN TSMIPGSTNQ QGITNQSQVE RTKLQDMDID NDGKDRPIMK 600 TDGRSENSVH KEAASEIPKG NTKDTN

Sequence ? help Back to Top

Protein Sequence Length: 626 aa Download sequence

MKLKKRSVSE KDISTFLPRY SPTTVLTLLQ EVSQVSEAKP KIDWNEIVKN TSTGISNPRE  60
YQMLWRHLAY RHALLDNLED ETAPLEDDSD LECELEPFPS FSCETSTEAA ACAKVFIASG  120
SSSHLSLPSS STIEAPLTIN LPRSYMAGVQ FEDADPACSI RGASITVPIS VQRQPVLTSP  180
SAEGLTTNGS TYGNNASRRK RKPWSEAEDL ELMAAVKKCG EGNWANILRG DFLSDRTASQ  240
LSQRWAIIKK RHGNLNVGAN TAGTQLSEVQ LAARHAMSLA LDRPVGSLKA ARISGSASTN  300
TIGNGSSLAP VASSEQVQDK LHQRPTHTKP HPVGSSSLTA KAQVTASKKM IPKSSFDSDC  360
IVKAAAVAAG ARIASPADAA CLLKAAQSKN AIHIMAKVPA STKTPTPARG PNHLEAHPSI  420
KTTTLPNTSA VMPSVTHGGG PVKITSSTTA TLSSVPTDQN ISVASVTAAA NPLSEKETKT  480
TEETRGLGLG GVQATAQKDC RSRQSISERV QEEKPADLGP PLKRQATETS NCSSSQNTST  540
ADVDIKVETG NQVEERQNAN TSMIPGSTNQ QGITNQSQVE RTKLQDMDID NDGKDRPIMK  600
TDGRSENSVH KEAASEIPKG NTKDTN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	4e-72	MYB_related family protein