PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022951484.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

TALE

Protein Properties

Length: 500aa MW: 55495.1 Da PI: 6.0493

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022951484.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	26	1.6e-08	438	476	18	54
HHHH..SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 18 lFek..nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +F++ ++yp+ +e+ LA k gLt +qV++WF N R + XP_022951484.1 438 MFQNflHPYPKDTEKHLLAVKSGLTRNQVSNWFINARVR 476 6887779******************************88 PP
2	BELL	53.3	7e-18	315	377	7	70
BELL 7 kkkakLlslleeVdkrYkqyveqlqtvissFeavaglgsakpYtslAlkaiSrhFrcLkdaiae 70 +k+++Ll+l++ +d+rY q+ ++++tv s+F+a+++l++ +++ + ++i+ +++L+++i++ XP_022951484.1 315 AKRSHLLTLQQLIDERYTQCLDEIHTVTSAFHAATDLDP-RLHFHYTYQTITSVYKSLREKITN 377 799**********************************.********************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 500 aa Download sequence
MASTNSVIVG EILPLRTPIA AGFPILLTLR ESGCPATDAD DHIVDQLGFL GSSPMATAPP 60 RNDMGDVSGG CLNLSGNAEF QDQLAGAIPI ASVSPVNAKD SAFSTPQFHQ LGTFRTRFEH 120 SSSNASNSSF ASSLNCEGDE SLCNANNEWE NGHFPYNQPI ARGNPVRSDF QTISSMENLV 180 QNGWMPSNTM NSKLWNELSL SLATSKPVIV GGTNFLDQYS QLTFSGATQP CLNNTELACN 240 SMDLSLSYNY GSPVHPSQAI SGSRYLSVIQ DILSQIASYP LESSDQVSHS STTVGFVPFS 300 SSSLETQWPK PSGDAKRSHL LTLQQLIDER YTQCLDEIHT VTSAFHAATD LDPRLHFHYT 360 YQTITSVYKS LREKITNCIL AMGMNSNTVC TKEKEKSFET TFIQNQWALQ QLKRKDNQLW 420 RAQRGLPENS VSVLRAWMFQ NFLHPYPKDT EKHLLAVKSG LTRNQVSNWF INARVRLWKP 480 MIEEMYAEMS RRNSFQNDEG

Sequence ? help Back to Top

Protein Sequence Length: 500 aa Download sequence

MASTNSVIVG EILPLRTPIA AGFPILLTLR ESGCPATDAD DHIVDQLGFL GSSPMATAPP  60
RNDMGDVSGG CLNLSGNAEF QDQLAGAIPI ASVSPVNAKD SAFSTPQFHQ LGTFRTRFEH  120
SSSNASNSSF ASSLNCEGDE SLCNANNEWE NGHFPYNQPI ARGNPVRSDF QTISSMENLV  180
QNGWMPSNTM NSKLWNELSL SLATSKPVIV GGTNFLDQYS QLTFSGATQP CLNNTELACN  240
SMDLSLSYNY GSPVHPSQAI SGSRYLSVIQ DILSQIASYP LESSDQVSHS STTVGFVPFS  300
SSSLETQWPK PSGDAKRSHL LTLQQLIDER YTQCLDEIHT VTSAFHAATD LDPRLHFHYT  360
YQTITSVYKS LREKITNCIL AMGMNSNTVC TKEKEKSFET TFIQNQWALQ QLKRKDNQLW  420
RAQRGLPENS VSVLRAWMFQ NFLHPYPKDT EKHLLAVKSG LTRNQVSNWF INARVRLWKP  480
MIEEMYAEMS RRNSFQNDEG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32980.1	9e-93	TALE family protein