PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_022951058.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
|
||||||||
Family | DBB | ||||||||
Protein Properties | Length: 306aa MW: 32965.4 Da PI: 6.9958 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 20.1 | 1.4e-06 | 4 | 43 | 5 | 38 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 C+ +e+ ++ fC+ ++ lC+ C H+ H+ XP_022951058.1 4 QCDVCEKGDASVFCTADEAALCNLCDHRVHHAnklaskHR 43 7******88*******************964446777776 PP | |||||||
2 | zf-B_box | 24.1 | 7.2e-08 | 54 | 95 | 2 | 37 |
zf-B_box 2 eerkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 e+++C+ + e + lfC++++ lC++C + +H+ H XP_022951058.1 54 EAPVCDVCRERRGFLFCQQDRAILCRECDDPIHSAneltmkH 95 6799*******9*********************655666666 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 306 aa Download sequence |
MKIQCDVCEK GDASVFCTAD EAALCNLCDH RVHHANKLAS KHRRFSLLRS AAAEAPVCDV 60 CRERRGFLFC QQDRAILCRE CDDPIHSANE LTMKHDRFLL TGIKLSTTAA LYAPPPSDEK 120 PIKTGHRTGS DHKSKGSVKK PTVVPAAPVG CTSSVCVNAS TNIPPAVAMN KGGGGQIPTG 180 GGGSASSISE YLMETLPGWH FEDLLDSSVP PPFMECEGLG LPFEEGDFNS GLSPSERLEL 240 WVPQGPIYGS GLMMNSGVKD TKDLVVNSSK VNRVWADDCF TVPQITSTAA PSAGFKRSRS 300 LWYNNH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT1G75540.1 | 9e-69 | DBB family protein |